RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
RAB40B-206ENST00000571995 EFCAB12Q6NXP0 572 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 ZNF354CQ86Y25 554 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 SAYSD1Q9NPB0 183 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 CYP39A1Q9NYL5 469 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 UBIAD1Q9Y5Z9 338 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 A0A1B0GUL6 1792 aa17.25■□□□□ 0.35
RAB40B-206ENST00000571995 OATP04181 439 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 ZSCAN5DPP0CG00 497 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 DSG3P32926 999 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 KLK14Q9P0G3 267 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 BAIAP2L1Q9UHR4 511 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 CCDC88AQ3V6T2 1871 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 RPL21P46778 160 aaKnown RBP17.24■□□□□ 0.35
RAB40B-206ENST00000571995 C4orf19Q8IY42 314 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 SEPT1Q8WYJ6 367 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 ANKRD36BP1Q96IX9 119 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 ADGRA3Q8IWK6 1321 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 CLTAP09496 248 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 MDH1P40925 334 aaKnown RBP17.24■□□□□ 0.35
RAB40B-206ENST00000571995 E2F5Q15329 346 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 NKIRAS1Q9NYS0 192 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 CTNNAL1Q9UBT7 734 aa17.24■□□□□ 0.35
RAB40B-206ENST00000571995 DHX15O43143 795 aaKnown RBP17.23■□□□□ 0.35
RAB40B-206ENST00000571995 PSMC1P62191 440 aaKnown RBP17.23■□□□□ 0.35
RAB40B-206ENST00000571995 ZNF667Q5HYK9 610 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 GPAT2Q6NUI2 795 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 SLC13A5Q86YT5 568 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-206ENST00000571995 OR6B3Q8NGW1 331 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 TBC1D31Q96DN5 1066 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 HMGB1P1B2RPK0 211 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-206ENST00000571995 PPP2R2AP63151 447 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 ZNF844Q08AG5 666 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 GKAP1Q5VSY0 366 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-206ENST00000571995 NETO2Q8NC67 525 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 TCP11Q8WWU5 503 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 FEZ2Q9UHY8 353 aaPredicted RBP17.23■□□□□ 0.35
RAB40B-206ENST00000571995 MAD1L1Q9Y6D9 718 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 B4GALT5O43286 388 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 CDR2Q01850 454 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 GPS1Q13098 491 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 ALCAMQ13740 583 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 KIZQ2M2Z5 673 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 NUGGCQ68CJ6 796 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 LRRC57Q8N9N7 239 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 PRMT1Q99873 361 aaKnown RBP17.23■□□□□ 0.35
RAB40B-206ENST00000571995 SLITRK6Q9H5Y7 841 aa17.23■□□□□ 0.35
RAB40B-206ENST00000571995 NEBLO76041 1014 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 SUPT20HL2P0C7V6 817 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 CXCL8P10145 99 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 PRKCIP41743 596 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 FMO1Q01740 532 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 KRT81Q14533 505 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 KCTD6Q8NC69 237 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 TACO1Q9BSH4 297 aaKnown RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 MIF4GDA9UHW6 222 aaKnown RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 M0QYV0 167 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 RNF8O76064 485 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 CHN1P15882 459 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 CATSPER4Q7RTX7 472 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 ACTRT1Q8TDG2 376 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 ADPGKQ9BRR6 497 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 GDF3Q9NR23 364 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 KCND2Q9NZV8 630 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 AGAP1Q9UPQ3 857 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 DYNC1LI2O43237 492 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 ETS1P14921 441 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 MARSP56192 900 aaKnown RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 BPIFB4P59827 614 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 SP2Q02086 613 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 ZNF473Q8WTR7 871 aaKnown RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 CARD9Q9H257 536 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 HES2Q9Y543 173 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 KAT6AQ92794 2004 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 LCA5LO95447 670 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 UBA1P22314 1058 aaKnown RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 HSD17B4P51659 736 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 NEDD9Q14511 834 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 FAXCQ5TGI0 409 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 C1orf228Q6PIY5 440 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 PRELID2Q8N945 189 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 ARHGEF2Q92974 986 aaKnown RBP17.22■□□□□ 0.35
RAB40B-206ENST00000571995 SPATC1LQ9H0A9 340 aa17.22■□□□□ 0.35
RAB40B-206ENST00000571995 PHF2O75151 1096 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 YY1P25490 414 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 GPC3P51654 580 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 ITGA8P53708 1063 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 YWHAGP61981 247 aaKnown RBP eCLIP17.21■□□□□ 0.35
RAB40B-206ENST00000571995 RPL7AP62424 266 aaKnown RBP17.21■□□□□ 0.35
RAB40B-206ENST00000571995 DUOXA2Q1HG44 320 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 ANKS4BQ8N8V4 417 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 FAM53CQ9NYF3 392 aa17.21■□□□□ 0.35
RAB40B-206ENST00000571995 POLIQ9UNA4 740 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms