RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 TNFRSF25Q93038 417 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 HEXIM2Q96MH2 286 aaKnown RBP11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 CENPKQ9BS16 269 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 RBAKQ9NYW8 714 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 AGO2Q9UKV8 859 aaKnown RBP11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 PFDN1O60925 122 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 TNFRSF8P28908 595 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 PGM1P36871 562 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 TMEM119Q4V9L6 283 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 CIAPIN1Q6FI81 312 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 SWSAP1Q6NVH7 229 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 NT5DC3Q86UY8 548 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 NUDCD3Q8IVD9 361 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 SP8Q8IXZ3 490 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 FUKQ8N0W3 1084 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 MREGQ8N565 214 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 PCDHB2Q9Y5E7 798 aa11.77□□□□□ -0.53
PCDHGA4-201ENST00000571252 GTPBP10A4D1E9 387 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 TRPA1O75762 1119 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 RALAP11233 206 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 ADRA2BP18089 450 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 ARL4AP40617 200 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 PSMC1P62191 440 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 CD302Q8IX05 232 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 KIRREL3Q8IZU9 778 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 IQCKQ8N0W5 287 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 CEP120Q8N960 986 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 EIF1ADQ8N9N8 165 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 SLC35C1Q96A29 364 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 MASTLQ96GX5 879 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 RTFDC1Q9BY42 306 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 NDE1Q9NXR1 346 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 COL1A1P02452 1464 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 LRP6O75581 1613 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 CCDC195A0A1B0GUA6 201 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 CFLARO15519 480 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 HNRNPCL1O60812 293 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 KCNMA1Q12791 1236 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 CRYMQ14894 314 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 PSMC3IPQ9P2W1 217 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 CCDC22O60826 627 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 IFI35P80217 286 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 ITGB3BPQ13352 177 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 MTM1Q13496 603 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 ZNF699Q32M78 642 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 MOXD1Q6UVY6 613 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 RCOR2Q8IZ40 523 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 KLF6Q99612 283 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 DDX56Q9NY93 547 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 FAF1Q9UNN5 650 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 SGPL1O95470 568 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 GHRP10912 638 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 YTHDF3Q7Z739 585 aaKnown RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 TSSK1BQ9BXA7 367 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 PCDHA10Q9Y5I2 948 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 NUP98P52948 1817 aa11.76□□□□□ -0.53
PCDHGA4-201ENST00000571252 AP2B1P63010 937 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 LRRC23Q53EV4 343 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 EEPD1Q7L9B9 569 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 RIBC1Q8N443 379 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 PIP4K2CQ8TBX8 421 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 SLC20A1Q8WUM9 679 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 PPWD1Q96BP3 646 aaKnown RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 MYH7P12883 1935 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ZNF263O14978 683 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ECE2O60344 883 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 FGRP09769 529 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 MARK3P27448 753 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 NOP14P78316 857 aaKnown RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 DNAJC9Q8WXX5 260 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 NLRP4Q96MN2 994 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 PI4K2AQ9BTU6 479 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 TMEM8AQ9HCN3 771 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 EPS15L1Q9UBC2 864 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 TLK1Q9UKI8 766 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ASAP2O43150 1006 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 TARSP26639 723 aaKnown RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ACOT2P49753 483 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 POLR3FQ9H1D9 316 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 RPF1Q9H9Y2 349 aaKnown RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ASNSD1Q9NWL6 643 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 HERC5Q9UII4 1024 aaKnown RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 MYO3BQ8WXR4 1341 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ZBTB24O43167 697 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ATP6V1G2O95670 118 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 GZMAP12544 262 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 KDSRQ06136 332 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 APTXQ7Z2E3 356 aaKnown RBP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 ALKBH8Q96BT7 664 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms