RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ALX1Q15699 326 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 UVSSAQ2YD98 709 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 RTP2Q5QGT7 225 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 AXDND1Q5T1B0 1012 aaPredicted RBP7.8□□□□□ -1.16
CHD3-213ENST00000571249 TWF2Q6IBS0 349 aaKnown RBP7.8□□□□□ -1.16
CHD3-213ENST00000571249 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 PADI6Q6TGC4 694 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 MFSD6Q6ZSS7 791 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 MFSD6LQ8IWD5 586 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 COLGALT2Q8IYK4 626 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 EXOC6Q8TAG9 804 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 ESR2Q92731 530 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 SMARCD2Q92925 531 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 WBP1Q96G27 269 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 SCLT1Q96NL6 688 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 APOL6Q9BWW8 343 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 BMP2KQ9NSY1 1161 aaPredicted RBP7.8□□□□□ -1.16
CHD3-213ENST00000571249 UBIAD1Q9Y5Z9 338 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 SPG11Q96JI7 2443 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 BSNQ9UPA5 3926 aa7.8□□□□□ -1.16
CHD3-213ENST00000571249 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 WDR27A2RRH5 827 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 GOLGA8CPA6NN73 597 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 CBFA2T3O75081 653 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 RNF40O75150 1001 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 HMMRO75330 724 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 ATXN1LP0C7T5 689 aaKnown RBP7.79□□□□□ -1.16
CHD3-213ENST00000571249 GJA1P17302 382 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 ATP4AP20648 1035 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 HOXA9P31269 272 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 NFKB2Q00653 900 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 TNK2Q07912 1038 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 AAMPQ13685 434 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 QPCTQ16769 361 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 SLC35G1Q2M3R5 365 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 PRSS36Q5K4E3 855 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 FSTL4Q6MZW2 842 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 EFCAB12Q6NXP0 572 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 RALGPS2Q86X27 583 aaPredicted RBP7.79□□□□□ -1.16
CHD3-213ENST00000571249 SYT12Q8IV01 421 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 NAXDQ8IW45 347 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 SIRT2Q8IXJ6 389 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 FAM200AQ8TCP9 573 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 CUL5Q93034 780 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 PGBD4Q96DM1 585 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 MED8Q96G25 268 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 LIN37Q96GY3 246 aaPredicted RBP7.79□□□□□ -1.16
CHD3-213ENST00000571249 CCDC136Q96JN2 1154 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 LRRC3BQ96PB8 259 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 MAP7D2Q96T17 732 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 SDF4Q9BRK5 362 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 ALG2Q9H553 416 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 FAM105AQ9NUU6 356 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 KIAA1522Q9P206 1035 aaPredicted RBP7.79□□□□□ -1.16
CHD3-213ENST00000571249 TFIP11Q9UBB9 837 aaKnown RBP7.79□□□□□ -1.16
CHD3-213ENST00000571249 EBF1Q9UH73 591 aa7.79□□□□□ -1.16
CHD3-213ENST00000571249 PDCD11Q14690 1871 aaKnown RBP7.79□□□□□ -1.16
CHD3-213ENST00000571249 KIF26AQ9ULI4 1882 aaPredicted RBP7.79□□□□□ -1.16
CHD3-213ENST00000571249 VWA8A3KMH1 1905 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 MYH6P13533 1939 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 IGKV6D-21A0A0A0MT36 114 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 MAFGO15525 162 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 RRP8O43159 456 aaKnown RBP7.78□□□□□ -1.16
CHD3-213ENST00000571249 APBB3O95704 486 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 ITPKAP23677 461 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 SOX11P35716 441 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 GPC3P51654 580 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 GFPT1Q06210 699 aaPredicted RBP7.78□□□□□ -1.16
CHD3-213ENST00000571249 VAC14Q08AM6 782 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 CCDC173Q0VFZ6 552 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 USP41Q3LFD5 358 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 USP39Q53GS9 565 aaKnown RBP7.78□□□□□ -1.16
CHD3-213ENST00000571249 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 ARHGAP40Q5TG30 622 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 FAM160B1Q5W0V3 765 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 FUT10Q6P4F1 479 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 IQCA1Q86XH1 822 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 TBC1D10CQ8IV04 446 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 CKAP2LQ8IYA6 745 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 LRRC71Q8N4P6 559 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 RLN3Q8WXF3 142 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 TTC9Q92623 222 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 FNBP1Q96RU3 617 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 ZSCAN10Q96SZ4 725 aaPredicted RBP7.78□□□□□ -1.16
CHD3-213ENST00000571249 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 LRRCC1Q9C099 1032 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 OCEL1Q9H607 264 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 CPNE5Q9HCH3 593 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 FBRSL1Q9HCM7 1045 aaKnown RBP7.78□□□□□ -1.16
CHD3-213ENST00000571249 ZNF302Q9NR11 478 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 MIOSQ9NXC5 875 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 KANSL3Q9P2N6 904 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 CACNG4Q9UBN1 327 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 MAD2L2Q9UI95 211 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 MAN2B2Q9Y2E5 1009 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 PCDHGA10Q9Y5H3 936 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 OTOGQ6ZRI0 2925 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 KNL1Q8NG31 2342 aa7.78□□□□□ -1.16
CHD3-213ENST00000571249 NEDD4P46934 1319 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms