RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 SLC38A7Q9NVC3 462 aa19.23■□□□□ 0.67
CIITA-206ENST00000571190 MTF2Q9Y483 593 aaPredicted RBP19.23■□□□□ 0.67
CIITA-206ENST00000571190 TDRD15B5MCY1 1934 aaKnown RBP19.23■□□□□ 0.67
CIITA-206ENST00000571190 SEC24AO95486 1093 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 SP9P0CG40 484 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 SLC10A6Q3KNW5 377 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 C8orf34Q49A92 452 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 SEZ6Q53EL9 994 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 HYIQ5T013 277 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 DTHD1Q6ZMT9 781 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 TMEM161BQ8NDZ6 487 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 SPIRE2Q8WWL2 714 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 MCRS1Q96EZ8 462 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 SHDQ96IW2 340 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 C17orf75Q9HAS0 396 aa19.22■□□□□ 0.67
CIITA-206ENST00000571190 AVENQ9NQS1 362 aaPredicted RBP19.22■□□□□ 0.67
CIITA-206ENST00000571190 MRPS23Q9Y3D9 190 aaKnown RBP19.22■□□□□ 0.67
CIITA-206ENST00000571190 KANSL1LA0AUZ9 987 aa19.21■□□□□ 0.67
CIITA-206ENST00000571190 NRG2O14511 850 aaPredicted RBP19.21■□□□□ 0.67
CIITA-206ENST00000571190 SYN3O14994 580 aa19.21■□□□□ 0.67
CIITA-206ENST00000571190 RPL9P32969 192 aaKnown RBP19.21■□□□□ 0.67
CIITA-206ENST00000571190 RAD51AP2Q09MP3 1159 aa19.21■□□□□ 0.67
CIITA-206ENST00000571190 MLF2Q15773 248 aaPredicted RBP19.21■□□□□ 0.67
CIITA-206ENST00000571190 TCHPQ9BT92 498 aa19.21■□□□□ 0.67
CIITA-206ENST00000571190 HAPLN2Q9GZV7 340 aa19.21■□□□□ 0.67
CIITA-206ENST00000571190 FBXL5Q9UKA1 691 aa19.21■□□□□ 0.67
CIITA-206ENST00000571190 COL4A3Q01955 1670 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 DOCK8Q8NF50 2099 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 SHISA7A6NL88 538 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 TOM1L1O75674 476 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 LMNAP02545 664 aaKnown RBP19.2■□□□□ 0.66
CIITA-206ENST00000571190 MAPTP10636 758 aaKnown RBP19.2■□□□□ 0.66
CIITA-206ENST00000571190 HARSP12081 509 aaKnown RBP19.2■□□□□ 0.66
CIITA-206ENST00000571190 PLS3P13797 630 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 ATF2P15336 505 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 CEBPBP17676 345 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 CD72P21854 359 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 ATP2C1P98194 919 aaPredicted RBP19.2■□□□□ 0.66
CIITA-206ENST00000571190 PRKCQQ04759 706 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 PRSS36Q5K4E3 855 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 TCEAL8Q8IYN2 117 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 SYT2Q8N9I0 419 aaPredicted RBP19.2■□□□□ 0.66
CIITA-206ENST00000571190 TCEAL4Q96EI5 215 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 SUSD3Q96L08 255 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 PLIN2Q99541 437 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 TIPINQ9BVW5 301 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 SEMA4AQ9H3S1 761 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 GDE1Q9NZC3 331 aa19.2■□□□□ 0.66
CIITA-206ENST00000571190 ECI2O75521 394 aa19.19■□□□□ 0.66
CIITA-206ENST00000571190 PTPN2P17706 415 aa19.19■□□□□ 0.66
CIITA-206ENST00000571190 CCR2P41597 374 aa19.19■□□□□ 0.66
CIITA-206ENST00000571190 SLC12A3P55017 1021 aa19.19■□□□□ 0.66
CIITA-206ENST00000571190 ARPP19P56211 112 aa19.19■□□□□ 0.66
CIITA-206ENST00000571190 ZRSR1Q15695 479 aaKnown RBP19.19■□□□□ 0.66
CIITA-206ENST00000571190 TANGO2Q6ICL3 276 aa19.19■□□□□ 0.66
CIITA-206ENST00000571190 TUBGCP4Q9UGJ1 667 aa19.19■□□□□ 0.66
CIITA-206ENST00000571190 PTPRZ1P23471 2315 aaPredicted RBP19.18■□□□□ 0.66
CIITA-206ENST00000571190 NPHP3-ACAD11A0A0J9YXS1 232 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 PRRG1O14668 218 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 LRG1P02750 347 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 FCARP24071 287 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 ELF1P32519 619 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 MCL1Q07820 350 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 NOLC1Q14978 699 aaKnown RBP eCLIP19.18■□□□□ 0.66
CIITA-206ENST00000571190 ARSHQ5FYA8 562 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 ZPBP2Q6X784 338 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 TBC1D32Q96NH3 1257 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 CORO1BQ9BR76 489 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 OSBPL6Q9BZF3 934 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 CYP4F11Q9HBI6 524 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 LTB4R2Q9NPC1 389 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 ANKFY1Q9P2R3 1169 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 NUB1Q9Y5A7 615 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 INSL5Q9Y5Q6 135 aa19.18■□□□□ 0.66
CIITA-206ENST00000571190 VPS13AQ96RL7 3174 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 FAM170BA6NMN3 283 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 H7C4K7 107 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 MOSPD3O75425 235 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 PFKPQ01813 784 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 CACNB1Q02641 598 aaPredicted RBP19.17■□□□□ 0.66
CIITA-206ENST00000571190 UBXN2BQ14CS0 331 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 ZBTB6Q15916 424 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 CTXN3Q4LDR2 81 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 TMEM119Q4V9L6 283 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 RILPL1Q5EBL4 403 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 TPGS2Q68CL5 300 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 MCTP1Q6DN14 999 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 HS6ST3Q8IZP7 471 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 KCNG4Q8TDN1 519 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 DDX12PQ92771 950 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 CEP72Q9P209 647 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 VWA8A3KMH1 1905 aa19.17■□□□□ 0.66
CIITA-206ENST00000571190 TTC26A0AVF1 554 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 VWA3AA6NCI4 1184 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 CD2BP2O95400 341 aaKnown RBP19.16■□□□□ 0.66
CIITA-206ENST00000571190 PLA2G4BP0C869 781 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 CXCL8P10145 99 aa19.16■□□□□ 0.66
CIITA-206ENST00000571190 TARSP26639 723 aaKnown RBP19.16■□□□□ 0.66
CIITA-206ENST00000571190 MCM4P33991 863 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms