RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 SLC38A7Q9NVC3 462 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 TBC1D7Q9P0N9 293 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 MTRRQ9UBK8 725 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 LIMD1Q9UGP4 676 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 NR2E1Q9Y466 385 aa5.9□□□□□ -1.46
CHD3-212ENST00000570758 MUC3AQ02505 3323 aa5.9□□□□□ -1.47
CHD3-212ENST00000570758 TECTAO75443 2155 aa5.9□□□□□ -1.47
CHD3-212ENST00000570758 FRMD3A2A2Y4 597 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 PPEF2O14830 753 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 HNRNPDLO14979 420 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 TBC1D4O60343 1298 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CUTAO60888 179 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 PPP6R2O75170 966 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 C1RP00736 705 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 C8AP07357 584 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 ADRB2P07550 413 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 HSP90AA1P07900 732 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 NFICP08651 508 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 IDEP14735 1019 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 SCP2P22307 547 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 ADSSP30520 456 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 LRPAP1P30533 357 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 RPL9P32969 192 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 ACOT2P49753 483 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 NTHL1P78549 312 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 KCNA1Q09470 495 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 RAB33AQ14088 237 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 MRPL58Q14197 206 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 E2F4Q16254 413 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 KYAT1Q16773 422 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 VARS2Q5ST30 1063 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 JADE1Q6IE81 842 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 PDXDC1Q6P996 788 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 SHC4Q6S5L8 630 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CRELD2Q6UXH1 353 aaPredicted RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 CYP26C1Q6V0L0 522 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 TRIM67Q6ZTA4 783 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CCDC149Q6ZUS6 474 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 ANKS3Q6ZW76 656 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 GLIS3Q8NEA6 775 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 ZSWIM2Q8NEG5 633 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 HPS3Q969F9 1004 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 DHX58Q96C10 678 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 HVCN1Q96D96 273 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 FAM212AQ96EL1 285 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 ASIC4Q96FT7 647 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CHAMP1Q96JM3 812 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 SUSD3Q96L08 255 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 MYADMQ96S97 322 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 MSTO1Q9BUK6 570 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 RHOBTB2Q9BYZ6 727 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 PLEKHA4Q9H4M7 779 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 RPF1Q9H9Y2 349 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 PLEKHA5Q9HAU0 1116 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 WDR6Q9NNW5 1121 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 PANK4Q9NVE7 773 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 ZDHHC7Q9NXF8 308 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 SEL1LQ9UBV2 794 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CPSF3Q9UKF6 684 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 PCDHB8Q9UN66 801 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 USTQ9Y2C2 406 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 BACE2Q9Y5Z0 518 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CDY1Q9Y6F8 540 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 STYXL1Q9Y6J8 313 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CLUHO75153 1309 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 PDCD11Q14690 1871 aaKnown RBP5.89□□□□□ -1.47
CHD3-212ENST00000570758 MYH15Q9Y2K3 1946 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 CITO14578 2027 aa5.89□□□□□ -1.47
CHD3-212ENST00000570758 MTCL1Q9Y4B5 1905 aaKnown RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 WDR27A2RRH5 827 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 SYN3O14994 580 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 CCL16O15467 120 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 TRAPPC3O43617 180 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 PRPF6O94906 941 aaKnown RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 GCNT3O95395 438 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 SEC24AO95486 1093 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 PDGFBP01127 241 aaPredicted RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 GAP43P17677 238 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 GBP2P32456 591 aaPredicted RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 MCM4P33991 863 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 AARSP49588 968 aaKnown RBP eCLIP5.88□□□□□ -1.47
CHD3-212ENST00000570758 ARPP19P56211 112 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 WNT7BP56706 349 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 ROR1Q01973 937 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 DNM1Q05193 864 aaKnown RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 PPP2R3AQ06190 1150 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 SIGLEC14Q08ET2 396 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 PPM1LQ5SGD2 360 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 L1TD1Q5T7N2 865 aaKnown RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 SPATA1Q5VX52 437 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 ADALQ6DHV7 355 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 SLFN12LQ6IEE8 588 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 SLC8B1Q6J4K2 584 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 ELMSAN1Q6PJG2 1045 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 GET4Q7L5D6 327 aaPredicted RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 OTOP3Q7RTS5 596 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 BMP8AQ7Z5Y6 402 aa5.88□□□□□ -1.47
CHD3-212ENST00000570758 GRASPQ7Z6J2 395 aaPredicted RBP5.88□□□□□ -1.47
CHD3-212ENST00000570758 EFCAB13Q8IY85 973 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms