RNA–Protein interactions for RNA: ENST00000570098.2

CHRFAM7A-207, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5

Gene CHRFAM7A, Length 316 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-207ENST00000570098 TNFSF13BQ9Y275 285 aa2.42□□□□□ -2.02
CHRFAM7A-207ENST00000570098 USTQ9Y2C2 406 aa2.42□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SSX2IPQ9Y2D8 614 aa2.42□□□□□ -2.02
CHRFAM7A-207ENST00000570098 USP24Q9UPU5 2620 aa2.42□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SNRNP200O75643 2136 aaKnown RBP2.42□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SF3B1O75533 1304 aaKnown RBP eCLIP2.42□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ACACAQ13085 2346 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PCM1Q15154 2024 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 FRYQ5TBA9 3013 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 NBEAQ8NFP9 2946 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SMIM28A0A1B0GU29 152 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TTC26A0AVF1 554 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 WDR27A2RRH5 827 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 VPS37CA5D8V6 355 aaPredicted RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 KRBA1A5PL33 1030 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LACTBL1A8MY62 500 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TISP43B9A030 160 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ANKRD63C9JTQ0 380 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ANHXE9PGG2 379 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 H0Y858 1186 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 H3BQV1 296 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TMEM189-UBE2V1I3L0A0 370 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LAD1O00515 517 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PODXLO00592 558 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PPEF2O14830 753 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GALR2O43603 387 aaPredicted RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PI15O43692 258 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 FAM189A1O60320 539 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TBC1D4O60343 1298 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GFRA3O60609 400 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LRRN2O75325 713 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 NR1I2O75469 434 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SEC24AO95486 1093 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 VNN2O95498 520 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 C1RP00736 705 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 C8AP07357 584 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CFHP08603 1231 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 HNRNPA1P09651 372 aaKnown RBP eCLIP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PLA2G4BP0C869 781 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CXCL8P10145 99 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MCF2P10911 925 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SRFP11831 508 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LAMP2P13473 410 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PLS3P13797 630 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 KCNE1P15382 129 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CEBPBP17676 345 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PLCG1P19174 1290 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 FSHRP23945 695 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GUCY2CP25092 1073 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 NMT1P30419 496 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 OR1D2P34982 312 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TNFSF9P41273 254 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CLCN5P51795 746 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 NCKAP1LP55160 1127 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ROR1Q01973 937 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CREMQ03060 361 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SPAG1Q07617 926 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ELAVL2Q12926 359 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RESTQ13127 1097 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 DMP1Q13316 513 aaPredicted RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CUL4AQ13619 759 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 HTR4Q13639 388 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RAB33AQ14088 237 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 DHX8Q14562 1220 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 MCM6Q14566 821 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 KARSQ15046 597 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PTPAQ15257 358 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SF3A1Q15459 793 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ENOX2Q16206 610 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 UPP1Q16831 310 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SLC5A9Q2M3M2 681 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SLC10A6Q3KNW5 377 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 RILPL1Q5EBL4 403 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 XKR4Q5GH76 650 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SPECC1Q5M775 1068 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PPM1LQ5SGD2 360 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 VARS2Q5ST30 1063 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 AXDND1Q5T1B0 1012 aaPredicted RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LIN9Q5TKA1 542 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 LARP1BQ659C4 914 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ARL6IP4Q66PJ3 421 aaKnown RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ASTLQ6HA08 431 aaPredicted RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 FAM173BQ6P4H8 233 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SLC39A4Q6P5W5 647 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 DCLRE1AQ6PJP8 1040 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 CYP26C1Q6V0L0 522 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 USP49Q70CQ1 688 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GRASPQ7Z6J2 395 aaPredicted RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GPBP1Q86WP2 473 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SIX5Q8N196 739 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 PLCD3Q8N3E9 789 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SLC44A3Q8N4M1 653 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SYT2Q8N9I0 419 aaPredicted RBP2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 TMEM161BQ8NDZ6 487 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ZSWIM2Q8NEG5 633 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 FLCNQ8NFG4 579 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SLC7A14Q8TBB6 771 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 GPR152Q8TDT2 470 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 SPIRE2Q8WWL2 714 aa2.41□□□□□ -2.02
CHRFAM7A-207ENST00000570098 ING5Q8WYH8 240 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms