RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 VPS52Q8N1B4 723 aa21.39■■□□□ 1.01
NAE1-222ENST00000569963 RDH13Q8NBN7 331 aa21.39■■□□□ 1.01
NAE1-222ENST00000569963 CACTINQ8WUQ7 758 aaKnown RBP21.39■■□□□ 1.01
NAE1-222ENST00000569963 ZBP1Q9H171 429 aa21.39■■□□□ 1.01
NAE1-222ENST00000569963 NSUN3Q9H649 340 aaKnown RBP21.39■■□□□ 1.01
NAE1-222ENST00000569963 PDE11AQ9HCR9 933 aa21.39■■□□□ 1.01
NAE1-222ENST00000569963 SF3B1O75533 1304 aaKnown RBP eCLIP21.38■■□□□ 1.01
NAE1-222ENST00000569963 PPP1R3GB7ZBB8 358 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 BIN1O00499 593 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 PAX3P23760 479 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 CCNE1P24864 410 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 WNT7BP56706 349 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 LRRC63Q05C16 580 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 ELAVL2Q12926 359 aaKnown RBP21.38■■□□□ 1.01
NAE1-222ENST00000569963 ADAM9Q13443 819 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 FUT10Q6P4F1 479 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 FOXR2Q6PJQ5 311 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 CD300LGQ6UXG3 332 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 TMC7Q7Z402 723 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 EFCAB13Q8IY85 973 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 GPR65Q8IYL9 337 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 MICAL1Q8TDZ2 1067 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 TSG101Q99816 390 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 TCF25Q9BQ70 676 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 HERC2P3Q9BVR0 1158 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 GPR62Q9BZJ7 368 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 CHST7Q9NS84 486 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 SSX2IPQ9Y2D8 614 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 FRMD4BQ9Y2L6 1034 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 IRAK3Q9Y616 596 aa21.38■■□□□ 1.01
NAE1-222ENST00000569963 TRAPPC3O43617 180 aa21.37■■□□□ 1.01
NAE1-222ENST00000569963 CD44P16070 742 aaKnown RBP21.37■■□□□ 1.01
NAE1-222ENST00000569963 NR2F2P24468 414 aa21.37■■□□□ 1.01
NAE1-222ENST00000569963 IRS1P35568 1242 aa21.37■■□□□ 1.01
NAE1-222ENST00000569963 SMC1AQ14683 1233 aaKnown RBP21.37■■□□□ 1.01
NAE1-222ENST00000569963 ANKRD40Q6AI12 368 aa21.37■■□□□ 1.01
NAE1-222ENST00000569963 MRPL43Q8N983 215 aaKnown RBP21.37■■□□□ 1.01
NAE1-222ENST00000569963 PPP2R3CQ969Q6 453 aa21.37■■□□□ 1.01
NAE1-222ENST00000569963 ENTPD7Q9NQZ7 604 aa21.37■■□□□ 1.01
NAE1-222ENST00000569963 DPP3Q9NY33 737 aa21.37■■□□□ 1.01
NAE1-222ENST00000569963 ANO9A1A5B4 782 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 PIRO00625 290 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 PTMSP20962 102 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 ENPEPQ07075 957 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 DUOXA2Q1HG44 320 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 USP41Q3LFD5 358 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 RBM43Q6ZSC3 357 aaKnown RBP21.36■■□□□ 1.01
NAE1-222ENST00000569963 TAS1R1Q7RTX1 841 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 WDR49Q8IV35 697 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 ZC3H3Q8IXZ2 948 aaKnown RBP21.36■■□□□ 1.01
NAE1-222ENST00000569963 C3orf58Q8NDZ4 430 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 FNBP1Q96RU3 617 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 INTS13Q9NVM9 706 aa21.36■■□□□ 1.01
NAE1-222ENST00000569963 CETN3O15182 167 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 CXCL14O95715 111 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 CASP4P49662 377 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 MCCD1P59942 119 aaPredicted RBP21.35■■□□□ 1.01
NAE1-222ENST00000569963 CLDN10P78369 228 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 TFAMQ00059 246 aaKnown RBP21.35■■□□□ 1.01
NAE1-222ENST00000569963 FKBP3Q00688 224 aaKnown RBP21.35■■□□□ 1.01
NAE1-222ENST00000569963 DSG1Q02413 1049 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 TCEAL5Q5H9L2 206 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 KIAA0319Q5VV43 1072 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 PLPP4Q5VZY2 271 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 C9orf57Q5W0N0 161 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 CEP135Q66GS9 1140 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 MLKLQ8NB16 471 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 MAFAQ8NHW3 353 aaPredicted RBP21.35■■□□□ 1.01
NAE1-222ENST00000569963 HASPINQ8TF76 798 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 CGRRF1Q99675 332 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 MKNK1Q9BUB5 465 aa21.35■■□□□ 1.01
NAE1-222ENST00000569963 MRPL17Q9NRX2 175 aaKnown RBP21.35■■□□□ 1.01
NAE1-222ENST00000569963 ATG2AQ2TAZ0 1938 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 C2orf71A6NGG8 1288 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 NCK2O43639 380 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 LILRB3O75022 631 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 IGFBP6P24592 240 aaPredicted RBP21.34■■□□□ 1.01
NAE1-222ENST00000569963 PSMC2P35998 433 aaKnown RBP21.34■■□□□ 1.01
NAE1-222ENST00000569963 GLUD2P49448 558 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 GUCY2FP51841 1108 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 PMS1P54277 932 aaKnown RBP21.34■■□□□ 1.01
NAE1-222ENST00000569963 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.34■■□□□ 1.01
NAE1-222ENST00000569963 TMC2Q8TDI7 906 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 PARD3BQ8TEW8 1205 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 ANKRD36BP1Q96IX9 119 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 CDCA3Q99618 268 aaPredicted RBP21.34■■□□□ 1.01
NAE1-222ENST00000569963 ITGA11Q9UKX5 1188 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 NUB1Q9Y5A7 615 aa21.34■■□□□ 1.01
NAE1-222ENST00000569963 PRRC2BQ5JSZ5 2229 aaKnown RBP21.34■■□□□ 1.01
NAE1-222ENST00000569963 BICDL2A1A5D9 508 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 FSD2A1L4K1 749 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 HIDE1A8MVS5 230 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 AKAP3O75969 853 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 TNNC2P02585 160 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 URODP06132 367 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 TMEM191BP0C7N4 346 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 FGFR3P22607 806 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 AARSP49588 968 aaKnown RBP eCLIP21.33■■□□□ 1.01
NAE1-222ENST00000569963 AP3M2P53677 418 aa21.33■■□□□ 1.01
NAE1-222ENST00000569963 PTPN14Q15678 1187 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms