RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TRDMT1O14717 391 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 TERTO14746 1132 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 RNF40O75150 1001 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 MOSPD3O75425 235 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 CCNE2O96020 404 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 CFIP05156 583 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 HLA-EP13747 358 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 CR2P20023 1033 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 ITGB3BPQ13352 177 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 UBAP2LQ14157 1087 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 LY6DQ14210 128 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 DMC1Q14565 340 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 KRTAP21-3Q3LHN1 58 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 FBXO43Q4G163 708 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 ARHGAP29Q52LW3 1261 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 ZKSCAN2Q63HK3 967 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 SWSAP1Q6NVH7 229 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 PDZD4Q76G19 769 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 PRICKLE2Q7Z3G6 844 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 MARCH9Q86YJ5 346 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 CKAP2LQ8IYA6 745 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 ENAHQ8N8S7 591 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 CNNM3Q8NE01 707 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 SNIP1Q8TAD8 396 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 WHAMMQ8TF30 809 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 BAP1Q92560 729 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 RSPRY1Q96DX4 576 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 GAD1Q99259 594 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 MXRA8Q9BRK3 442 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 FZD8Q9H461 694 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 RNF41Q9H4P4 317 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 FSCN3Q9NQT6 498 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 MIOSQ9NXC5 875 aa7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 SPENQ96T58 3664 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 SF3B1O75533 1304 aaKnown RBP eCLIP7.45□□□□□ -1.22
HERPUD1-217ENST00000569429 MTORP42345 2549 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 ARL5CA6NH57 179 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 CYTH3O43739 400 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 HMMRO75330 724 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 LRG1P02750 347 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 SYPP08247 313 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 POU3F2P20265 443 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 OR1D2P34982 312 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 PTGER3P43115 390 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 CXADRP78310 365 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 TLE3Q04726 772 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 PTPAQ15257 358 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 SMAD1Q15797 465 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 CYP4A22Q5TCH4 519 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 MIS18BP1Q6P0N0 1132 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 HAUS6Q7Z4H7 955 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 RABEPKQ7Z6M1 372 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 ITPRIPQ8IWB1 547 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 FAM9BQ8IZU0 186 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 OLIG1Q8TAK6 271 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 TTC8Q8TAM2 541 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 TTC9Q92623 222 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 ACDQ96AP0 544 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 NXPE2Q96DL1 559 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 CNOT6LQ96LI5 555 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 CORO1BQ9BR76 489 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 TRIM4Q9C037 500 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 AGPAT5Q9NUQ2 364 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 SNTG2Q9NY99 539 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 HSPBP1Q9NZL4 362 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 PCOLCE2Q9UKZ9 415 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 MED13LQ71F56 2210 aa7.44□□□□□ -1.22
HERPUD1-217ENST00000569429 CELSR2Q9HCU4 2923 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 A0A087WZ62 844 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 TADA2AO75478 443 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 EGFP01133 1207 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 ITGA4P13612 1032 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 DRD1P21728 446 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 ITPKAP23677 461 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 KIF5BP33176 963 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 SCNN1GP51170 649 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 EPHA5P54756 1037 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 HAND2P61296 217 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 NBR1Q14596 966 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 ITPRIPL2Q3MIP1 535 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 PREPLQ4J6C6 727 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 UBXN11Q5T124 520 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 FAM171A1Q5VUB5 890 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 LYSMD4Q5XG99 296 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 CATSPER4Q7RTX7 472 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 ZNF410Q86VK4 478 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 CEP57Q86XR8 500 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 TBC1D10CQ8IV04 446 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 MIER1Q8N108 512 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 LEMD2Q8NC56 503 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 TSTD1Q8NFU3 115 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 OR2I1PQ8NGU4 316 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 RPLP0P6Q8NHW5 317 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 ZFYVE19Q96K21 471 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 FAM167AQ96KS9 214 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 FNBP1Q96RU3 617 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 ZSCAN10Q96SZ4 725 aaPredicted RBP7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 FDXACB1Q9BRP7 624 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms