RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 ST6GALNAC4Q9H4F1 302 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 AZI2Q9H6S1 392 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 CHST7Q9NS84 486 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 MAP3K20Q9NYL2 800 aaKnown RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 GTF3C4Q9UKN8 822 aa9.35□□□□□ -0.91
LINC00558-201ENST00000569422 DIS3Q9Y2L1 958 aaKnown RBP9.35□□□□□ -0.91
LINC00558-201ENST00000569422 FOXO6A8MYZ6 492 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 STBD1O95210 358 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 CHRNA3P32297 505 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 COILP38432 576 aaPredicted RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 IFT88Q13099 833 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 STXBP2Q15833 593 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 ZDHHC24Q6UX98 284 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 OR5B17Q8NGF7 314 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 ZNF473Q8WTR7 871 aaKnown RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TIPINQ9BVW5 301 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 HAPLN2Q9GZV7 340 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 EPN3Q9H201 632 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 R3HDMLQ9H3Y0 253 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TTC7AQ9ULT0 858 aaPredicted RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 COMMD10Q9Y6G5 202 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 SPDYE16A6NNV3 312 aaPredicted RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 PI4K2BG5E9Z4 385 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 THAP12O43422 761 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 KIAA0754O94854 1291 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 SUPT20HL2P0C7V6 817 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 GLRA2P23416 452 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 PTGIRP43119 386 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 CORO7P57737 925 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 IFI35P80217 286 aaPredicted RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 DHX34Q14147 1143 aaKnown RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 CLEC16AQ2KHT3 1053 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 SUPT20HL1Q3ZLR7 823 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 XKR3Q5GH77 459 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 LRIG3Q6UXM1 1119 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 SCARA5Q6ZMJ2 495 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 CATSPERGQ6ZRH7 1159 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TAX1BP1Q86VP1 789 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 HS6ST3Q8IZP7 471 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 LRRC71Q8N4P6 559 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 REPS2Q8NFH8 660 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 MGARPQ8TDB4 240 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 EPS8L3Q8TE67 593 aaKnown RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 SPIRE2Q8WWL2 714 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 ACSF2Q96CM8 615 aaPredicted RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 HERPUD2Q9BSE4 406 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TSPYL1Q9H0U9 437 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 ZDHHC18Q9NUE0 388 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 GRIN3BO60391 1043 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 CYP1A2P05177 515 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 EDN1P05305 212 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 PGK2P07205 417 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TNFSF9P41273 254 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 IFNAR2P48551 515 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 PPP2R2AP63151 447 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 LY6KQ17RY6 165 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 MMS22LQ6ZRQ5 1243 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 MCOLN2Q8IZK6 566 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 TMEM130Q8N3G9 435 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 ARFGAP2Q8N6H7 521 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 SAMD3Q8N6K7 520 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 SLC17A8Q8NDX2 589 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 MYCBPAPQ8TBZ2 947 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 RPS6KC1Q96S38 1066 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 NTPCRQ9BSD7 190 aaKnown RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 GRHL1Q9NZI5 618 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 MTRF1LQ9UGC7 380 aaKnown RBP9.34□□□□□ -0.91
LINC00558-201ENST00000569422 PCDHA3Q9Y5H8 950 aa9.34□□□□□ -0.91
LINC00558-201ENST00000569422 FAM187AA6NFU0 413 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 H0YHG0 523 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 EXTL3O43909 919 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 DKC1O60832 514 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 ECEL1O95672 775 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 GJB1P08034 283 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 GNA15P30679 374 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 TGFB2P61812 414 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 KRT17Q04695 432 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 CALCOCO2Q13137 446 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 ATP13A4Q4VNC1 1196 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 HAUS1Q96CS2 278 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 DDX23Q9BUQ8 820 aaKnown RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 VPS33BQ9H267 617 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 APOBEC3GQ9HC16 384 aaKnown RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 MLXIPLQ9NP71 852 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 ARHGAP28Q9P2N2 729 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 COQ4Q9Y3A0 265 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 SPATA31C2B4DYI2 1134 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 RGS16O15492 202 aaPredicted RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 CSDE1O75534 798 aaKnown RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 CST3P01034 146 aaPredicted RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 OATP04181 439 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 QPCTQ16769 361 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms