RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 SEL1LQ9UBV2 794 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 EXOC7Q9UPT5 735 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 MAPK8IP1Q9UQF2 711 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 NUB1Q9Y5A7 615 aa9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 TIMM13Q9Y5L4 95 aaPredicted RBP9.82□□□□□ -0.84
GTF3C1-210ENST00000569394 XIRP2A4UGR9 3374 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 PLXNA3P51805 1871 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 A0A0B4J269 797 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 FRMD3A2A2Y4 597 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 TNFRSF10AO00220 468 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 PPEF2O14830 753 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 TEX28O15482 410 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 MBTPS2O43462 519 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 GADD45BO75293 160 aaPredicted RBP9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 ZNF202O95125 648 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 SLFN14P0C7P3 912 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 ADSSP30520 456 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 MCM4P33991 863 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 CYP2J2P51589 502 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 WNT7BP56706 349 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 UPP1Q16831 310 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 CTC1Q2NKJ3 1217 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 USP41Q3LFD5 358 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 KIAA0319Q5VV43 1072 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 ISM2Q6H9L7 571 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 SLFN12LQ6IEE8 588 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 PDE12Q6L8Q7 609 aaKnown RBP9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 ANKRD54Q6NXT1 300 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 ARMCX5Q6P1M9 558 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 DCLRE1AQ6PJP8 1040 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 ALKAL1Q6UXT8 129 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 UNC13DQ70J99 1090 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 RPGRIP1Q96KN7 1286 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 EXOC1Q9NV70 894 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 CNTN3Q9P232 1028 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 PDCD11Q14690 1871 aaKnown RBP9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 SF3B1O75533 1304 aaKnown RBP eCLIP9.81□□□□□ -0.844e-6■■■■■ 34.5
GTF3C1-210ENST00000569394 BRWD1Q9NSI6 2320 aa9.81□□□□□ -0.84
GTF3C1-210ENST00000569394 TTC26A0AVF1 554 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 ADAM12O43184 909 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 NCK2O43639 380 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 CLSTN1O94985 981 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 PIGRP01833 764 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 SRGAP2BP0DMP2 458 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 HOXD13P35453 343 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 MLLT3P42568 568 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 TFAMQ00059 246 aaKnown RBP9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 DSG1Q02413 1049 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 STK4Q13043 487 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 PNOCQ13519 176 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 TMEM132DQ14C87 1099 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 PSMD5Q16401 504 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 PPP1R15BQ5SWA1 713 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 SCARA3Q6AZY7 606 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 SYCE2Q6PIF2 218 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 CD300LGQ6UXG3 332 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 CRELD2Q6UXH1 353 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 KRBA2Q6ZNG9 492 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 ST13P5Q8NFI4 369 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 SCFD1Q8WVM8 642 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 RSPH1Q8WYR4 309 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 CASP10Q92851 521 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 TTPALQ9BTX7 342 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 STRA6Q9BX79 667 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 CD320Q9NPF0 282 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 MAN1C1Q9NR34 630 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 OLFML3Q9NRN5 406 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 SLC38A7Q9NVC3 462 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 CPSF3Q9UKF6 684 aaKnown RBP9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 HPSEQ9Y251 543 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 USP15Q9Y4E8 981 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 ANK1P16157 1881 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 VWA8A3KMH1 1905 aa9.8□□□□□ -0.84
GTF3C1-210ENST00000569394 ZMYM2Q9UBW7 1377 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 KLRC4O43908 158 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 FAM189A1O60320 539 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 LILRB3O75022 631 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 RFPL2O75678 378 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 RPN1P04843 607 aaKnown RBP9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 KRT19P08727 400 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 KCNE1P15382 129 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 OR1D2P34982 312 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 CLCN4P51793 760 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 POSTNQ15063 836 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 XKR4Q5GH76 650 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 DSTYKQ6XUX3 929 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 STXBP4Q6ZWJ1 553 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 CBWD2Q8IUF1 395 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 GPD1LQ8N335 351 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 SLC22A17Q8WUG5 538 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 HVCN1Q96D96 273 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 MSLNLQ96KJ4 702 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 UROC1Q96N76 676 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 POP1Q99575 1024 aaKnown RBP9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 CDCA3Q99618 268 aaPredicted RBP9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 PYM1Q9BRP8 204 aaKnown RBP9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 ST6GALNAC4Q9H4F1 302 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 TMEM206Q9H813 350 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 MAGEF1Q9HAY2 307 aa9.79□□□□□ -0.84
GTF3C1-210ENST00000569394 PDE11AQ9HCR9 933 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms