RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ICA1Q05084 483 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 VGLL4Q14135 290 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 SART3Q15020 963 aaKnown RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 ANKRD1Q15327 319 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 ZRSR2Q15696 482 aaKnown RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 HSF5Q4G112 596 aaPredicted RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 LBX2Q6XYB7 198 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 UBE2R2Q712K3 238 aaPredicted RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 MICU3Q86XE3 530 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 SCYL3Q8IZE3 742 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 PDZD8Q8NEN9 1154 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDH11-216ENST00000569128 COG1Q8WTW3 980 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 NUP133Q8WUM0 1156 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 JPH3Q8WXH2 748 aaPredicted RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 DPF3Q92784 378 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 CCDC120Q96HB5 630 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 MTA3Q9BTC8 594 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 KAT14Q9H8E8 782 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 C19orf73Q9NVV2 129 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 NYAP2Q9P242 653 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 GULP1Q9UBP9 304 aa9.1□□□□□ -0.95
CDH11-216ENST00000569128 TIMM13Q9Y5L4 95 aaPredicted RBP9.1□□□□□ -0.95
CDH11-216ENST00000569128 TCRBV16S1A1N1A0A5B0 115 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 NEMP1O14524 444 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 ZBTB43O43298 467 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 PRPF3O43395 683 aaKnown RBP9.09□□□□□ -0.95
CDH11-216ENST00000569128 PFKFB2O60825 505 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 CTDNEP1O95476 244 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 TTLL1O95922 423 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 NF2P35240 595 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 MCM2P49736 904 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 RPL11P62913 178 aaKnown RBP9.09□□□□□ -0.95
CDH11-216ENST00000569128 PURAQ00577 322 aaKnown RBP9.09□□□□□ -0.95
CDH11-216ENST00000569128 CHRNEQ04844 493 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 TROAPQ12815 778 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 CUL4AQ13619 759 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 KIR3DS1Q14943 382 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 ZNF792Q3KQV3 632 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 CCDC178Q5BJE1 867 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 CATIPQ7Z7H3 387 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 TMTC2Q8N394 836 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 ZNF274Q96GC6 653 aaPredicted RBP9.09□□□□□ -0.95
CDH11-216ENST00000569128 ZSCAN31Q96LW9 406 aaPredicted RBP9.09□□□□□ -0.95
CDH11-216ENST00000569128 ARPC5LQ9BPX5 153 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 ORAI3Q9BRQ5 295 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 MENTQ9BUN1 341 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 MAF1Q9H063 256 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 CPVLQ9H3G5 476 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 GBA2Q9HCG7 927 aaPredicted RBP9.09□□□□□ -0.95
CDH11-216ENST00000569128 LUC7LQ9NQ29 371 aaKnown RBP9.09□□□□□ -0.95
CDH11-216ENST00000569128 IMPACTQ9P2X3 320 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 ZHX2Q9Y6X8 837 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 ATAD5Q96QE3 1844 aa9.09□□□□□ -0.95
CDH11-216ENST00000569128 SCO2A0A1W2PP80 73 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 GOLGA8AA7E2F4 631 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 JAK2O60674 1132 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 PPP1R11O60927 126 aaPredicted RBP9.08□□□□□ -0.96
CDH11-216ENST00000569128 PLEKHA8P1O95397 391 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 ASNSP08243 561 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 GOLGA8HP0CJ92 632 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 PYGMP11217 842 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 TRHRP34981 398 aaPredicted RBP9.08□□□□□ -0.96
CDH11-216ENST00000569128 GDNFP39905 211 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 NT5C2P49902 561 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 SCNN1BP51168 640 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 SPP2Q13103 211 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 LSAMPQ13449 338 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 BECN1Q14457 450 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 SLC35G1Q2M3R5 365 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 CDCA2Q69YH5 1023 aaPredicted RBP9.08□□□□□ -0.96
CDH11-216ENST00000569128 ARMC9Q7Z3E5 817 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 NBPF11Q86T75 865 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 SPPL2CQ8IUH8 684 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 OXR1Q8N573 874 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 FANCBQ8NB91 859 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 GTF3C6Q969F1 213 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 NUP88Q99567 741 aaPredicted RBP9.08□□□□□ -0.96
CDH11-216ENST00000569128 PLCD4Q9BRC7 762 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 ALG1Q9BT22 464 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 PPARGC1AQ9UBK2 798 aaKnown RBP9.08□□□□□ -0.96
CDH11-216ENST00000569128 RWDD3Q9Y3V2 267 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 PAPPA2Q9BXP8 1791 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 OTOFQ9HC10 1997 aa9.08□□□□□ -0.96
CDH11-216ENST00000569128 FRMPD2Q68DX3 1309 aaPredicted RBP9.07□□□□□ -0.96
CDH11-216ENST00000569128 MYH4Q9Y623 1939 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 DOCK1Q14185 1865 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 CCDC189A1A4V9 331 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 FITM1A5D6W6 292 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 NOTOA8MTQ0 251 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 F5H6K3 240 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 NDUFB10O96000 172 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 PDHBP11177 359 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 NAT1P18440 290 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 METAP2P50579 478 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDH11-216ENST00000569128 KLRC3Q07444 240 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 GRM4Q14833 912 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 KIZQ2M2Z5 673 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 SLFN13Q68D06 897 aa9.07□□□□□ -0.96
CDH11-216ENST00000569128 SYNE3Q6ZMZ3 975 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms