RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 HARSP12081 509 aaKnown RBP16.35■□□□□ 0.21
USB1-214ENST00000568848 XBP1P17861 261 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 PFKPQ01813 784 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 NBR1Q14596 966 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 SEZ6Q53EL9 994 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 VITQ6UXI7 678 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 PRR23BQ6ZRT6 265 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 PRIMPOLQ96LW4 560 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 NAP1L4Q99733 375 aaKnown RBP16.35■□□□□ 0.21
USB1-214ENST00000568848 CDV3Q9UKY7 258 aaKnown RBP16.35■□□□□ 0.21
USB1-214ENST00000568848 ZMYM2Q9UBW7 1377 aa16.35■□□□□ 0.21
USB1-214ENST00000568848 CNOT1A5YKK6 2376 aaKnown RBP16.34■□□□□ 0.21
USB1-214ENST00000568848 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 ACKR2O00590 384 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 PRRG1O14668 218 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 GDF9O60383 454 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 GDI1P31150 447 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 ADCY1Q08828 1119 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 ZNF174Q15697 407 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 ATF7IP2Q5U623 682 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 ZNF852Q6ZMS4 543 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 Q6ZS52 159 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 FAM177A1Q8N128 213 aaPredicted RBP16.34■□□□□ 0.21
USB1-214ENST00000568848 NSUN7Q8NE18 718 aaKnown RBP16.34■□□□□ 0.21
USB1-214ENST00000568848 OSBPL6Q9BZF3 934 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 CDT1Q9H211 546 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 LMAN1LQ9HAT1 526 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 KCNH3Q9ULD8 1083 aa16.34■□□□□ 0.21
USB1-214ENST00000568848 ARHGEF35A5YM69 484 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 CHURC1-FNTBB4DL54 471 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 PODXLO00592 558 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 LRG1P02750 347 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 OR4Q2P0C623 313 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 MYL4P12829 197 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 CYP11B2P19099 503 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 FNTBP49356 437 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
USB1-214ENST00000568848 CCDC6Q16204 474 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 STXBP5Q5T5C0 1151 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 HEATR6Q6AI08 1181 aaKnown RBP16.33■□□□□ 0.2
USB1-214ENST00000568848 MCPH1Q8NEM0 835 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 ELSPBP1Q96BH3 223 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 ADPGKQ9BRR6 497 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 C2orf40Q9H1Z8 148 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 CEP72Q9P209 647 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 INSL5Q9Y5Q6 135 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 BACE2Q9Y5Z0 518 aa16.33■□□□□ 0.2
USB1-214ENST00000568848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
USB1-214ENST00000568848 TMEM189-UBE2V1I3L0A0 370 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 POU2F2P09086 479 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 PTPN2P17706 415 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 CCNE1P24864 410 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 NAMPTP43490 491 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 SPAG1Q07617 926 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 TEAD2Q15562 447 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 UVSSAQ2YD98 709 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 TAS1R3Q7RTX0 852 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 ZBTB45Q96K62 511 aaPredicted RBP16.32■□□□□ 0.2
USB1-214ENST00000568848 ASB16Q96NS5 453 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 PGLYRP2Q96PD5 576 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 CRISPLD1Q9H336 500 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 ZNF334Q9HCZ1 680 aaPredicted RBP16.32■□□□□ 0.2
USB1-214ENST00000568848 FBXL5Q9UKA1 691 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 TIMM13Q9Y5L4 95 aaPredicted RBP16.32■□□□□ 0.2
USB1-214ENST00000568848 PIAS3Q9Y6X2 628 aa16.32■□□□□ 0.2
USB1-214ENST00000568848 PDCD11Q14690 1871 aaKnown RBP16.31■□□□□ 0.2
USB1-214ENST00000568848 CHD6Q8TD26 2715 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 ARHGEF37A1IGU5 675 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 HRO43593 1189 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 TBC1D4O60343 1298 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 ABLIM3O94929 683 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 VNN2O95498 520 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 NEFLP07196 543 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 RPS9P46781 194 aaKnown RBP16.31■□□□□ 0.2
USB1-214ENST00000568848 LMNB2Q03252 620 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 TWF1Q12792 350 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 DCAF4L1Q3SXM0 396 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 SLC8B1Q6J4K2 584 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 ANKS3Q6ZW76 656 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 PDZD4Q76G19 769 aaPredicted RBP16.31■□□□□ 0.2
USB1-214ENST00000568848 FAM3CQ92520 227 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 GTF3C6Q969F1 213 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 ZFYVE19Q96K21 471 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 NACC1Q96RE7 527 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 TRMT61BQ9BVS5 477 aaKnown RBP16.31■□□□□ 0.2
USB1-214ENST00000568848 TARS2Q9BW92 718 aaKnown RBP16.31■□□□□ 0.2
USB1-214ENST00000568848 BHMT2Q9H2M3 363 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 ZFP14Q9HCL3 533 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 BRMS1Q9HCU9 246 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 GDE1Q9NZC3 331 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
USB1-214ENST00000568848 RALGAPA1Q6GYQ0 2036 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 SLC38A8A6NNN8 435 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 PP2D1A8MPX8 630 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 SOAT2O75908 522 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms