RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 PLXNA3P51805 1871 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 K7ENM7 598 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 SYN3O14994 580 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 TBCAO75347 108 aaKnown RBP16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 CLTAP09496 248 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 MARCKSP29966 332 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 NTHL1P78549 312 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 VARS2Q5ST30 1063 aaKnown RBP16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 RSPO2Q6UXX9 243 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 SIX5Q8N196 739 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 TMEM105Q8N8V8 129 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 WNT16Q9UBV4 365 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 CDH7Q9ULB5 785 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 TBX20Q9UMR3 447 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 ZDBF2Q9HCK1 2354 aa16.32■□□□□ 0.2
CCNDBP1-213ENST00000568507 H0Y858 1186 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 HNRNPDLO14979 420 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 TRAK2O60296 914 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 CXCL8P10145 99 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 SRFP11831 508 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 ABCD1P33897 745 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 MCM4P33991 863 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 DDIT3P35638 169 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 ARPP19P56211 112 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 APPL2Q8NEU8 664 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 LARP4BQ92615 738 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 BLOC1S4Q9NUP1 217 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 CCDC39Q9UFE4 941 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 MYO10Q9HD67 2058 aa16.31■□□□□ 0.2
CCNDBP1-213ENST00000568507 MEFVO15553 781 aaPredicted RBP16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 XPOTO43592 962 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 LRG1P02750 347 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 POU2F2P09086 479 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 ZNF131P52739 623 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 ROR1Q01973 937 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 PPP2R3AQ06190 1150 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 SPAG1Q07617 926 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 CTXN3Q4LDR2 81 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 PABPC1LQ4VXU2 614 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 SLC8B1Q6J4K2 584 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 ZNF461Q8TAF7 563 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 KIF12Q96FN5 646 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 SUSD3Q96L08 255 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 PHOX2BQ99453 314 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 RTP3Q9BQQ7 232 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 HAPLN2Q9GZV7 340 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 RPF1Q9H9Y2 349 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 FAM86C1Q9NVL1 165 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 TUBGCP4Q9UGJ1 667 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 NUMBLQ9Y6R0 609 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 DENND4AQ7Z401 1863 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 PIEZO1Q92508 2521 aa16.3■□□□□ 0.2
CCNDBP1-213ENST00000568507 ANHXE9PGG2 379 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 PRRG1O14668 218 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 NPR3P17342 541 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 AOC1P19801 751 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 HTR4Q13639 388 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 ZNF280DQ6N043 979 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 MTSS1LQ765P7 747 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 ST13P5Q8NFI4 369 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 ITFG1Q8TB96 612 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 LRRC15Q8TF66 581 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 FGF13Q92913 245 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 KCNN1Q92952 543 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 MSTO1Q9BUK6 570 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 CYP4F11Q9HBI6 524 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 HCFC1R1Q9NWW0 138 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 DNMT3BQ9UBC3 853 aaKnown RBP16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 CA14Q9ULX7 337 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 C2orf16Q68DN1 1984 aa16.29■□□□□ 0.2
CCNDBP1-213ENST00000568507 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 WDR27A2RRH5 827 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 LACTBL1A8MY62 500 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 OGTO15294 1046 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 ABLIM3O94929 683 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 PIGRP01833 764 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 CYP3A5P20815 502 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 SYT1P21579 422 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 TXLNAP40222 546 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 TNFSF9P41273 254 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 MRPL58Q14197 206 aaKnown RBP16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 PARM1Q6UWI2 310 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 GPR152Q8TDT2 470 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 DDX12PQ92771 950 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 EPSTI1Q96J88 318 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 TSPAN18Q96SJ8 248 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 FBXL5Q9UKA1 691 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 KCNH3Q9ULD8 1083 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 PCDHB8Q9UN66 801 aa16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 MRPS23Q9Y3D9 190 aaKnown RBP16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 SRPRBQ9Y5M8 271 aaKnown RBP16.28■□□□□ 0.2
CCNDBP1-213ENST00000568507 PI15O43692 258 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms