RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 KCNMB3Q9NPA1 279 aa17.88■□□□□ 0.45
CLK3-223ENST00000568488 VWA8A3KMH1 1905 aa17.88■□□□□ 0.45
CLK3-223ENST00000568488 ZZEF1O43149 2961 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 HEPACAM2A8MVW5 462 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 TBX3O15119 743 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 TRAPPC3O43617 180 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 DGAT1O75907 488 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 MICAL2O94851 1124 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 SPINK2P20155 84 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 BRCC3P46736 316 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 PXNP49023 591 aaPredicted RBP17.87■□□□□ 0.45
CLK3-223ENST00000568488 CLCNKBP51801 687 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 DGKKQ5KSL6 1271 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 RNF43Q68DV7 783 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 MAEAQ7L5Y9 396 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 CACNA2D4Q7Z3S7 1137 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 KBTBD6Q86V97 674 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 ELMOD1Q8N336 334 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 KDF1Q8NAX2 398 aaPredicted RBP17.87■□□□□ 0.45
CLK3-223ENST00000568488 LOXL4Q96JB6 756 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 ZNF512Q96ME7 567 aaPredicted RBP17.87■□□□□ 0.45
CLK3-223ENST00000568488 POLR3FQ9H1D9 316 aaPredicted RBP17.87■□□□□ 0.45
CLK3-223ENST00000568488 SLITRK6Q9H5Y7 841 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 C8orf33Q9H7E9 229 aaPredicted RBP17.87■□□□□ 0.45
CLK3-223ENST00000568488 PRMT7Q9NVM4 692 aaPredicted RBP17.87■□□□□ 0.45
CLK3-223ENST00000568488 GDAQ9Y2T3 454 aa17.87■□□□□ 0.45
CLK3-223ENST00000568488 M0R2N6 131 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 N4BP3O15049 544 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 CCNT1O60563 726 aaKnown RBP17.86■□□□□ 0.45
CLK3-223ENST00000568488 ABLIM3O94929 683 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 SLITRK3O94933 977 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 EPN2O95208 641 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 SEC24AO95486 1093 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 CCDC192P0DO97 292 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 NOVA1P51513 510 aaKnown RBP17.86■□□□□ 0.45
CLK3-223ENST00000568488 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
CLK3-223ENST00000568488 GLRA4Q5JXX5 417 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 PPP4R3AQ6IN85 833 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 C1orf228Q6PIY5 440 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 KRT25Q7Z3Z0 450 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 GPIHBP1Q8IV16 184 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 TRIM22Q8IYM9 498 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 MSANTD3Q96H12 275 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 INSL5Q9Y5Q6 135 aa17.86■□□□□ 0.45
CLK3-223ENST00000568488 ANKRD11Q6UB99 2663 aaPredicted RBP17.85■□□□□ 0.45
CLK3-223ENST00000568488 SPEGQ15772 3267 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 TTLL13PA6NNM8 815 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 TMEM189-UBE2V1I3L0A0 370 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 GIPC1O14908 333 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 RPP40O75818 363 aaKnown RBP17.85■□□□□ 0.45
CLK3-223ENST00000568488 PRKCBP05771 671 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 ATF2P15336 505 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 LIG1P18858 919 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 MLLT6P55198 1093 aaPredicted RBP17.85■□□□□ 0.45
CLK3-223ENST00000568488 NID2Q14112 1375 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 TEAD2Q15562 447 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 GREB1Q4ZG55 1949 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 WDR44Q5JSH3 913 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 TXNDC11Q6PKC3 985 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 ZBTB8OSQ8IWT0 167 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 GAB3Q8WWW8 586 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 HAS1Q92839 578 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 JAKMIP1Q96N16 626 aaKnown RBP17.85■□□□□ 0.45
CLK3-223ENST00000568488 ADPGKQ9BRR6 497 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 PDZD7Q9H5P4 517 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 USP20Q9Y2K6 914 aa17.85■□□□□ 0.45
CLK3-223ENST00000568488 ZFYVE26Q68DK2 2539 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 COL4A2P08572 1712 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 NCANO14594 1321 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 CCDC194A0A1B0GVG4 234 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 SPECC1L-ADORA2AF8WAN1 911 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 ARNTLO00327 626 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 MOSPD3O75425 235 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 RAP1GAPP47736 663 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 PON2Q15165 354 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 SLC8B1Q6J4K2 584 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 CD300LGQ6UXG3 332 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 TCEAL8Q8IYN2 117 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 PRIMPOLQ96LW4 560 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 TRPV4Q9HBA0 871 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 GOLGA2P5Q9HBQ8 144 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 GPRC5CQ9NQ84 441 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 ANKEF1Q9NU02 776 aa17.84■□□□□ 0.45
CLK3-223ENST00000568488 FASNP49327 2511 aaKnown RBP17.83■□□□□ 0.45
CLK3-223ENST00000568488 A0A087WWV3 80 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 SOBPA7XYQ1 873 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 CHADO15335 359 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 EXTL3O43909 919 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 BAG4O95429 457 aaKnown RBP17.83■□□□□ 0.44
CLK3-223ENST00000568488 PDIA3P30101 505 aaKnown RBP17.83■□□□□ 0.44
CLK3-223ENST00000568488 HOXA6P31267 233 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 MPLP40238 635 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 RBM25P49756 843 aaKnown RBP17.83■□□□□ 0.44
CLK3-223ENST00000568488 ZNF252P-AS1Q0IIN9 211 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 TWF1Q12792 350 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.44
CLK3-223ENST00000568488 UPP1Q16831 310 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 PLA2G2CQ5R387 149 aa17.83■□□□□ 0.44
CLK3-223ENST00000568488 TCEAL6Q6IPX3 200 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms