RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 NASPP49321 788 aaPredicted RBP15.74■□□□□ 0.11
CMTM3-215ENST00000568477 RAB33AQ14088 237 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 STK38Q15208 465 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 CCDC73Q6ZRK6 1079 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 SV2BQ7L1I2 683 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 DYMQ7RTS9 669 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 MAP4K3Q8IVH8 894 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 SUGP1Q8IWZ8 645 aaKnown RBP15.74■□□□□ 0.11
CMTM3-215ENST00000568477 FAM122AQ96E09 287 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 FIZ1Q96SL8 496 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 BACE2Q9Y5Z0 518 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 TTC26A0AVF1 554 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 SYN3O14994 580 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 OGTO15294 1046 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 C8AP07357 584 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 HNRNPA1P09651 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
CMTM3-215ENST00000568477 GBP2P32456 591 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-215ENST00000568477 STAT6P42226 847 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 GTF2BQ00403 316 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 PPP2R3AQ06190 1150 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 PPM1LQ5SGD2 360 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 SFR1Q86XK3 245 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 FBXL6Q8N531 539 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 ASIC4Q96FT7 647 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 ZNF396Q96N95 335 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-215ENST00000568477 MSTO1Q9BUK6 570 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 TUBGCP4Q9UGJ1 667 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 CDY1Q9Y6F8 540 aa15.73■□□□□ 0.11
CMTM3-215ENST00000568477 PIEZO1Q92508 2521 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 A0A0B4J269 797 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 XPOTO43592 962 aaKnown RBP15.72■□□□□ 0.11
CMTM3-215ENST00000568477 GAP43P17677 238 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 HOXA9P31269 272 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 MCM4P33991 863 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 TNFSF9P41273 254 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 ENOX2Q16206 610 aaKnown RBP15.72■□□□□ 0.11
CMTM3-215ENST00000568477 VARS2Q5ST30 1063 aaKnown RBP15.72■□□□□ 0.11
CMTM3-215ENST00000568477 ZBTB41Q5SVQ8 909 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 LINC00301Q8NCQ3 95 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 DDX12PQ92771 950 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 KIF12Q96FN5 646 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 KCNH6Q9H252 994 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 ST6GALNAC4Q9H4F1 302 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 RPF1Q9H9Y2 349 aaKnown RBP15.72■□□□□ 0.11
CMTM3-215ENST00000568477 SEL1LQ9UBV2 794 aa15.72■□□□□ 0.11
CMTM3-215ENST00000568477 UBQLN1Q9UMX0 589 aaKnown RBP15.72■□□□□ 0.11
CMTM3-215ENST00000568477 MYMKA6NI61 221 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 LACTBL1A8MY62 500 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 H7C4K7 107 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 FAM189A1O60320 539 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.11
CMTM3-215ENST00000568477 XYLBO75191 536 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 PDIA4P13667 645 aaKnown RBP15.71■□□□□ 0.11
CMTM3-215ENST00000568477 SPAG1Q07617 926 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 ZC2HC1CQ53FD0 456 aaPredicted RBP15.71■□□□□ 0.11
CMTM3-215ENST00000568477 AXDND1Q5T1B0 1012 aaPredicted RBP15.71■□□□□ 0.11
CMTM3-215ENST00000568477 SLC39A4Q6P5W5 647 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 RSPO2Q6UXX9 243 aaPredicted RBP15.71■□□□□ 0.11
CMTM3-215ENST00000568477 GET4Q7L5D6 327 aaPredicted RBP15.71■□□□□ 0.11
CMTM3-215ENST00000568477 SLC7A14Q8TBB6 771 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 HVCN1Q96D96 273 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 SUSD3Q96L08 255 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 MYADMQ96S97 322 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 TSPAN18Q96SJ8 248 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 SMOC2Q9H3U7 446 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 IGSF9Q9P2J2 1179 aa15.71■□□□□ 0.11
CMTM3-215ENST00000568477 PDCD11Q14690 1871 aaKnown RBP15.71■□□□□ 0.11
CMTM3-215ENST00000568477 ANKRD63C9JTQ0 380 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 SPTLC2O15270 562 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 CCL16O15467 120 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 PPP6R2O75170 966 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 POU2F2P09086 479 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 CYP3A5P20815 502 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 LRPAP1P30533 357 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 ROR1Q01973 937 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 TDGQ13569 410 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 ZBTB6Q15916 424 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 UVSSAQ2YD98 709 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 FOXD4L5Q5VV16 416 aaPredicted RBP15.7■□□□□ 0.1
CMTM3-215ENST00000568477 SLFN12LQ6IEE8 588 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 SLC8B1Q6J4K2 584 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 RTL10Q7L3V2 364 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 ZNF720Q7Z2F6 126 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 CD302Q8IX05 232 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 APPL2Q8NEU8 664 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 FOXD4L4Q8WXT5 416 aaPredicted RBP15.7■□□□□ 0.1
CMTM3-215ENST00000568477 DNAJC19Q96DA6 116 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 FAM212AQ96EL1 285 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 PANK2Q9BZ23 570 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 MRPL44Q9H9J2 332 aaKnown RBP15.7■□□□□ 0.1
CMTM3-215ENST00000568477 KCNK12Q9HB15 430 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■■■■□ 22.5
CMTM3-215ENST00000568477 TFIP11Q9UBB9 837 aaKnown RBP15.7■□□□□ 0.1
CMTM3-215ENST00000568477 EPS15L1Q9UBC2 864 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 PCDHB8Q9UN66 801 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 POLIQ9UNA4 740 aa15.7■□□□□ 0.1
CMTM3-215ENST00000568477 DOCK8Q8NF50 2099 aa15.69■□□□□ 0.1
CMTM3-215ENST00000568477 A0A087X0B3 334 aa15.69■□□□□ 0.1
CMTM3-215ENST00000568477 TISP43B9A030 160 aa15.69■□□□□ 0.1
CMTM3-215ENST00000568477 PPP1R37O75864 691 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms