RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 GPBP1Q86WP2 473 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 SIX5Q8N196 739 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 ATOH1Q92858 354 aaPredicted RBP20.66■□□□□ 0.9
SPSB3-210ENST00000568416 CDH7Q9ULB5 785 aa20.66■□□□□ 0.9
SPSB3-210ENST00000568416 SYN3O14994 580 aa20.65■□□□□ 0.9
SPSB3-210ENST00000568416 ZNF131P52739 623 aa20.65■□□□□ 0.9
SPSB3-210ENST00000568416 ROR1Q01973 937 aa20.65■□□□□ 0.9
SPSB3-210ENST00000568416 MRPL58Q14197 206 aaKnown RBP20.65■□□□□ 0.9
SPSB3-210ENST00000568416 NUMBLQ9Y6R0 609 aa20.65■□□□□ 0.9
SPSB3-210ENST00000568416 MYO10Q9HD67 2058 aa20.65■□□□□ 0.9
SPSB3-210ENST00000568416 KRBA1A5PL33 1030 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 PI15O43692 258 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 ABLIM3O94929 683 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 PIGRP01833 764 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 PLCG1P19174 1290 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 MCM6Q14566 821 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 KARSQ15046 597 aaKnown RBP20.64■□□□□ 0.89
SPSB3-210ENST00000568416 ZNF461Q8TAF7 563 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 ITFG1Q8TB96 612 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 RAD54LQ92698 747 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 SUSD3Q96L08 255 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 PLEKHA5Q9HAU0 1116 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 HCFC1R1Q9NWW0 138 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 DNMT3BQ9UBC3 853 aaKnown RBP20.64■□□□□ 0.89
SPSB3-210ENST00000568416 TUBGCP4Q9UGJ1 667 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 POLIQ9UNA4 740 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 NUB1Q9Y5A7 615 aa20.64■□□□□ 0.89
SPSB3-210ENST00000568416 TTC26A0AVF1 554 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 WDR27A2RRH5 827 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 CLTAP09496 248 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 CXCL8P10145 99 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 SCP2P22307 547 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 DHX8Q14562 1220 aaKnown RBP20.63■□□□□ 0.89
SPSB3-210ENST00000568416 PARM1Q6UWI2 310 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 MYCT1Q8N699 235 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 ST13P5Q8NFI4 369 aaPredicted RBP20.63■□□□□ 0.89
SPSB3-210ENST00000568416 GPR152Q8TDT2 470 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 FGF13Q92913 245 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 FGF14Q92915 247 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 BICD1Q96G01 975 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 RTP3Q9BQQ7 232 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 RPP25Q9BUL9 199 aaKnown RBP20.63■□□□□ 0.89
SPSB3-210ENST00000568416 SLC2A4RGQ9NR83 387 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 TBX20Q9UMR3 447 aa20.63■□□□□ 0.89
SPSB3-210ENST00000568416 WDFY4Q6ZS81 3184 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 ARHGEF37A1IGU5 675 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 VPS37CA5D8V6 355 aaPredicted RBP20.62■□□□□ 0.89
SPSB3-210ENST00000568416 H7C4K7 107 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 K7ENM7 598 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 FAM189A1O60320 539 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 FAM13AO94988 1023 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 LRPAP1P30533 357 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 MCM4P33991 863 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 TNFSF9P41273 254 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 MATR3P43243 847 aaKnown RBP eCLIP20.62■□□□□ 0.89
SPSB3-210ENST00000568416 LIG4P49917 911 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 ZBTB6Q15916 424 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 PABPC1LQ4VXU2 614 aaKnown RBP20.62■□□□□ 0.89
SPSB3-210ENST00000568416 FIZ1Q96SL8 496 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 CCSER1Q9C0I3 900 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 PARVGQ9HBI0 331 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 FBXL5Q9UKA1 691 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 KCNH3Q9ULD8 1083 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 CA14Q9ULX7 337 aa20.62■□□□□ 0.89
SPSB3-210ENST00000568416 TRAK2O60296 914 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 ATF2P15336 505 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 SPAG1Q07617 926 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 PTPAQ15257 358 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 KYAT1Q16773 422 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 CCDC105Q8IYK2 499 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 TMEM130Q8N3G9 435 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 LARP4BQ92615 738 aaKnown RBP20.61■□□□□ 0.89
SPSB3-210ENST00000568416 DDX12PQ92771 950 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 PCDHB8Q9UN66 801 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 CLIC4Q9Y696 253 aa20.61■□□□□ 0.89
SPSB3-210ENST00000568416 PROB1E7EW31 1015 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 HNRNPDLO14979 420 aaKnown RBP20.6■□□□□ 0.89
SPSB3-210ENST00000568416 OGTO15294 1046 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 KRT18P05783 430 aaKnown RBP20.6■□□□□ 0.89
SPSB3-210ENST00000568416 ADRB2P07550 413 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 CYP3A5P20815 502 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 PDCP20941 246 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 ELF1P32519 619 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 ARPP19P56211 112 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 CTXN3Q4LDR2 81 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 ZBTB41Q5SVQ8 909 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 SLC39A4Q6P5W5 647 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 MTSS1LQ765P7 747 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 NPAS3Q8IXF0 933 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 TCEAL8Q8IYN2 117 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 APPL2Q8NEU8 664 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 RASSF8Q8NHQ8 419 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 KIF12Q96FN5 646 aa20.6■□□□□ 0.89
SPSB3-210ENST00000568416 AVENQ9NQS1 362 aaPredicted RBP20.6■□□□□ 0.89
SPSB3-210ENST00000568416 UBQLN1Q9UMX0 589 aaKnown RBP20.6■□□□□ 0.89
SPSB3-210ENST00000568416 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.6■□□□□ 0.89
SPSB3-210ENST00000568416 A0A0B4J269 797 aa20.59■□□□□ 0.89
SPSB3-210ENST00000568416 LACTBL1A8MY62 500 aa20.59■□□□□ 0.89
SPSB3-210ENST00000568416 M0QZQ0 153 aa20.59■□□□□ 0.89
SPSB3-210ENST00000568416 SEC24AO95486 1093 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms