RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 HNRNPDLO14979 420 aaKnown RBP11.53□□□□□ -0.56
PALB2-206ENST00000568219 TLR3O15455 904 aaKnown RBP11.53□□□□□ -0.56
PALB2-206ENST00000568219 SUPT3HO75486 399 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 GGPS1O95749 300 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 SAT1P21673 171 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 NPEPPSP55786 919 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 CAV1Q03135 178 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 LMNB2Q03252 620 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 NR1H3Q13133 447 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 LGSNQ5TDP6 509 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 TBC1D16Q8TBP0 767 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 TEKT1Q969V4 418 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 NDNQ99608 321 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 LRRC4BQ9NT99 713 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 SMG5Q9UPR3 1016 aaKnown RBP11.53□□□□□ -0.56
PALB2-206ENST00000568219 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.53□□□□□ -0.56
PALB2-206ENST00000568219 MYH6P13533 1939 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 C3P01024 1663 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 H7C0C1 242 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 SSTR1P30872 391 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 ATP5OP48047 213 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 RAB27AP51159 221 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 SCYL2Q6P3W7 929 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 IYDQ6PHW0 289 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 ARHGAP27Q6ZUM4 889 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 ARHGAP18Q8N392 663 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 XXYLT1Q8NBI6 393 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 ZNF75CPQ92670 426 aaPredicted RBP11.53□□□□□ -0.56
PALB2-206ENST00000568219 HAS1Q92839 578 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 EHMT1Q9H9B1 1298 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 ZDHHC18Q9NUE0 388 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 GRHL1Q9NZI5 618 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 PDP2Q9P2J9 529 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 GGA1Q9UJY5 639 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 CHKBQ9Y259 395 aa11.53□□□□□ -0.56
PALB2-206ENST00000568219 A0A1W2PPM1 405 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 E2F8A0AVK6 867 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 NOP56O00567 594 aaKnown RBP11.52□□□□□ -0.56
PALB2-206ENST00000568219 BANF1O75531 89 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 RTN3O95197 1032 aaPredicted RBP11.52□□□□□ -0.56
PALB2-206ENST00000568219 HSPA2P54652 639 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 MPP2Q14168 576 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 HIF1AQ16665 826 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 FAM182AQ5T1J6 154 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 PRPF39Q86UA1 669 aaKnown RBP11.52□□□□□ -0.56
PALB2-206ENST00000568219 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 NACC1Q96RE7 527 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 EPAS1Q99814 870 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 MTMR4Q9NYA4 1195 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 PCSK1NQ9UHG2 260 aa11.52□□□□□ -0.56
PALB2-206ENST00000568219 DDX3YO15523 660 aaKnown RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 USP1O94782 785 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 FESP07332 822 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 GSTA2P09210 222 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 TUBP50607 506 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 DSG1Q02413 1049 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 HSP90AA5PQ58FG0 334 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 WASHC2DQ5SRD0 308 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 DCAF12L1Q5VU92 463 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 CRLF3Q8IUI8 442 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 FAM81AQ8TBF8 368 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 BTBD10Q9BSF8 475 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 FAM200BP0CF97 657 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 ETS1P14921 441 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 BGNP21810 368 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 RRM1P23921 792 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 CERKLQ49MI3 558 aaPredicted RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 BRDTQ58F21 947 aaPredicted RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 NUDCD3Q8IVD9 361 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 ZNF513Q8N8E2 541 aaPredicted RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 TCP10LQ8TDR4 215 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 PYDC1Q8WXC3 89 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 MPP4Q96JB8 637 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 FAM84AQ96KN4 292 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 ZNF184Q99676 751 aaPredicted RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 TMEM120AQ9BXJ8 343 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 RANBP17Q9H2T7 1088 aaKnown RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 KCTD10Q9H3F6 313 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 AGPAT3Q9NRZ7 376 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 HNRNPRO43390 633 aaKnown RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 GJB6O95452 261 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 TPP2P29144 1249 aaPredicted RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 RINT1Q6NUQ1 792 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 TMEM270Q6UE05 265 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 VSTM1Q6UX27 236 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.52□□□□□ -0.57
PALB2-206ENST00000568219 POU5F2Q8N7G0 328 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 CLPTM1LQ96KA5 538 aa11.52□□□□□ -0.57
PALB2-206ENST00000568219 TRIM56Q9BRZ2 755 aaKnown RBP11.52□□□□□ -0.57
PALB2-206ENST00000568219 PSMG1O95456 288 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 STAMBPO95630 424 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 VCAM1P19320 739 aa11.51□□□□□ -0.57
PALB2-206ENST00000568219 CCNFP41002 786 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms