RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MCM6Q14566 821 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 PTPAQ15257 358 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 PSMD5Q16401 504 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 KYAT1Q16773 422 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 GLRA4Q5JXX5 417 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 RTP2Q5QGT7 225 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 LILRA6Q6PI73 481 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 DCLRE1AQ6PJP8 1040 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 ADGRD1Q6QNK2 874 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 PRSS55Q6UWB4 352 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 CCDC149Q6ZUS6 474 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 HFE2Q6ZVN8 426 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 RTL10Q7L3V2 364 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 OTOP3Q7RTS5 596 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 HAUS6Q7Z4H7 955 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 GPBP1Q86WP2 473 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 CEP57Q86XR8 500 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 PALB2Q86YC2 1186 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 MYCT1Q8N699 235 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 KREMEN2Q8NCW0 462 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 LNX1Q8TBB1 728 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 LRRC15Q8TF66 581 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 LARP4BQ92615 738 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 STAMQ92783 540 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 SNX21Q969T3 373 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 FAM122AQ96E09 287 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 BICD1Q96G01 975 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 EPSTI1Q96J88 318 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 ZBTB45Q96K62 511 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 SNX27Q96L92 541 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 ZMAT2Q96NC0 199 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 CLSTN3Q9BQT9 956 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 PLEKHA5Q9HAU0 1116 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 WDR6Q9NNW5 1121 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 ZDHHC7Q9NXF8 308 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 MTRRQ9UBK8 725 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 STK17AQ9UEE5 414 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 CCDC39Q9UFE4 941 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 FBXO2Q9UK22 296 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 TBX20Q9UMR3 447 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 MTMR6Q9Y217 621 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 SRPRBQ9Y5M8 271 aaKnown RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 MORC2Q9Y6X9 1032 aaPredicted RBP5.23□□□□□ -1.57
CLK3-219ENST00000567805 ZNF318Q5VUA4 2279 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 NOTCH4Q99466 2003 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 CLUHO75153 1309 aa5.23□□□□□ -1.57
CLK3-219ENST00000567805 TTC26A0AVF1 554 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 PODXLO00592 558 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 HNRNPDLO14979 420 aaKnown RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 SYN3O14994 580 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 OGTO15294 1046 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 XPOTO43592 962 aaKnown RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 TRAK2O60296 914 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 ZMYND10O75800 440 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 PIGRP01833 764 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 CLTAP09496 248 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 HNRNPA1P09651 372 aaKnown RBP eCLIP5.22□□□□□ -1.57
CLK3-219ENST00000567805 SPATA31D3P0C874 917 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 CXCL8P10145 99 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 PDIA4P13667 645 aaKnown RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 FGFR3P22607 806 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 MARCKSP29966 332 aaPredicted RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 HOXA9P31269 272 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 OR1D2P34982 312 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 LIG4P49917 911 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 GTF2BQ00403 316 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 CEBPZQ03701 1054 aaKnown RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 PPP2R3AQ06190 1150 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 RAB33AQ14088 237 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SLC39A14Q15043 492 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 UVSSAQ2YD98 709 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SLC10A6Q3KNW5 377 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SPECC1Q5M775 1068 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 LIN9Q5TKA1 542 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 RRAGBQ5VZM2 374 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 FAM173BQ6P4H8 233 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 CD300LGQ6UXG3 332 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 CCDC73Q6ZRK6 1079 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SPATA31D4Q6ZUB0 917 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 ANKS3Q6ZW76 656 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 USP49Q70CQ1 688 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 MAP4K3Q8IVH8 894 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 GLYCTKQ8IVS8 523 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SUGP1Q8IWZ8 645 aaKnown RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 FBXL6Q8N531 539 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 KRI1Q8N9T8 703 aaKnown RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 C3orf58Q8NDZ4 430 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 FEZF2Q8TBJ5 459 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SMG7Q92540 1137 aaKnown RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 PBXIP1Q96AQ6 731 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 C18orf25Q96B23 403 aaPredicted RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 ZNF707Q96C28 371 aaPredicted RBP5.22□□□□□ -1.57
CLK3-219ENST00000567805 ASIC4Q96FT7 647 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 CLIC6Q96NY7 704 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 USP28Q96RU2 1077 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 TSPAN18Q96SJ8 248 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 PRRX2Q99811 253 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 PRKD2Q9BZL6 878 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms