RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	TTC26	A0AVF1	554 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	MYMK	A6NI61	221 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	LACTBL1	A8MY62	500 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	PODXL	O00592	558 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	HNRNPDL	O14979	420 aa	Known RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	SPTLC2	O15270	562 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	OGT	O15294	1046 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	MEFV	O15553	781 aa	Predicted RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	RFPL2	O75678	378 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	ZMYND10	O75800	440 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	PIGR	P01833	764 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	GAP43	P17677	238 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	TKT	P29401	623 aa	Known RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	NMT1	P30419	496 aa	Known RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	STAT6	P42226	847 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	BRCC3	P46736	316 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	NASP	P49321	788 aa	Predicted RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	GTF2B	Q00403	316 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	SIGLEC14	Q08ET2	396 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	RAB33A	Q14088	237 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	STK38	Q15208	465 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	UVSSA	Q2YD98	709 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	SLFN12L	Q6IEE8	588 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	CCDC73	Q6ZRK6	1079 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	CCDC149	Q6ZUS6	474 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	ANKS3	Q6ZW76	656 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	ZNF720	Q7Z2F6	126 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	UBALD2	Q8IYN6	164 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	LINC00301	Q8NCQ3	95 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	DDX12P	Q92771	950 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	TSPAN18	Q96SJ8	248 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	ST6GALNAC4	Q9H4F1	302 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	RPF1	Q9H9Y2	349 aa	Known RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	WDR6	Q9NNW5	1121 aa	Known RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	MTRR	Q9UBK8	725 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	SEL1L	Q9UBV2	794 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	SORCS3	Q9UPU3	1222 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	BACE2	Q9Y5Z0	518 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	CACNA1H	O95180	2353 aa		7.54	□□□□□ -1.2
SF3B3-209	ENST00000567635	ANKRD63	C9JTQ0	380 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635		H7C4K7	107 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635		I3L4J1	428 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	ADAM12	O43184	909 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	PPP6R2	O75170	966 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	ADRB2	P07550	413 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	HNRNPA1	P09651	372 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	ZSCAN22	P10073	491 aa	Predicted RBP	7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	CXCL8	P10145	99 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	CYP3A5	P20815	502 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	GBP2	P32456	591 aa	Predicted RBP	7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	TNFSF9	P41273	254 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	MTMR3	Q13615	1198 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	POSTN	Q15063	836 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	ZBTB6	Q15916	424 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	PPM1L	Q5SGD2	360 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	LIN9	Q5TKA1	542 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	SLC39A4	Q6P5W5	647 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	RTL10	Q7L3V2	364 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	SFR1	Q86XK3	245 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	CD302	Q8IX05	232 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	PDILT	Q8N807	584 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	C3orf58	Q8NDZ4	430 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	STAM	Q92783	540 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	ZNF707	Q96C28	371 aa	Predicted RBP	7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	HVCN1	Q96D96	273 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	DNAJC19	Q96DA6	116 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	FAM212A	Q96EL1	285 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	KIF12	Q96FN5	646 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	ASIC4	Q96FT7	647 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	SUSD3	Q96L08	255 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	FIZ1	Q96SL8	496 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	MSTO1	Q9BUK6	570 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	LRRC27	Q9C0I9	530 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	MRPL44	Q9H9J2	332 aa	Known RBP	7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	FBXW11	Q9UKB1	542 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	NUB1	Q9Y5A7	615 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	CDY1	Q9Y6F8	540 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	STYXL1	Q9Y6J8	313 aa		7.53	□□□□□ -1.2
SF3B3-209	ENST00000567635	CLUH	O75153	1309 aa		7.52	□□□□□ -1.2
SF3B3-209	ENST00000567635	PIEZO1	Q92508	2521 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635		A0A087X0B3	334 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	SYN3	O14994	580 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	XPOT	O43592	962 aa	Known RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	FAM189A1	O60320	539 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	CUTA	O60888	179 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	XYLB	O75191	536 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ABLIM3	O94929	683 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	YEATS4	O95619	227 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ASGR2	P07307	311 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	IDE	P14735	1019 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	FSHR	P23945	695 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	LRPAP1	P30533	357 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	HOXA9	P31269	272 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	MCM4	P33991	863 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ACOT2	P49753	483 aa		7.52	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms