RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CTCFLQ8NI51 663 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-216ENST00000567071 TTC8Q8TAM2 541 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 GTPBP2Q9BX10 602 aaKnown RBP10.8□□□□□ -0.68
CAPN3-216ENST00000567071 SUCLA2Q9P2R7 463 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-216ENST00000567071 EBF1Q9UH73 591 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 GIT1Q9Y2X7 761 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 PTPRQQ9UMZ3 2332 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 IFIT3O14879 490 aaKnown RBP10.79□□□□□ -0.68
CAPN3-216ENST00000567071 ADAM12O43184 909 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 WISP1O95388 367 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 FAM193AP78312 1265 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 CYP4F3Q08477 520 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 NCBP1Q09161 790 aaKnown RBP10.79□□□□□ -0.68
CAPN3-216ENST00000567071 FCHO2Q0JRZ9 810 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 GRIK3Q13003 919 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 LEMD2Q8NC56 503 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 EXOC4Q96A65 974 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 ACDQ96AP0 544 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 JPH2Q9BR39 696 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-216ENST00000567071 LZTS2Q9BRK4 669 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 ZNF577Q9BSK1 485 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 TRIM6Q9C030 488 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-216ENST00000567071 IPPQ9Y573 584 aa10.79□□□□□ -0.68
CAPN3-216ENST00000567071 TEX51A0A1B0GUA7 166 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 ARHGEF37A1IGU5 675 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 WDR64B1ANS9 1081 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 RNF40O75150 1001 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 ERLIN2O94905 339 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 CFIP05156 583 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 SMARCA1P28370 1054 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 PLCB2Q00722 1185 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 PTH1RQ03431 593 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 GFPT1Q06210 699 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-216ENST00000567071 DRP2Q13474 957 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 SRGAP1Q7Z6B7 1085 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 SYT12Q8IV01 421 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 PNPLA1Q8N8W4 532 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
CAPN3-216ENST00000567071 HASPINQ8TF76 798 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 RABGGTAQ92696 567 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 ZSWIM3Q96MP5 696 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 FCRL3Q96P31 734 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-216ENST00000567071 ARID3AQ99856 593 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
CAPN3-216ENST00000567071 UPF2Q9HAU5 1272 aaKnown RBP10.78□□□□□ -0.68
CAPN3-216ENST00000567071 GTSE1Q9NYZ3 720 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 INVSQ9Y283 1065 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 CDY1Q9Y6F8 540 aa10.78□□□□□ -0.68
CAPN3-216ENST00000567071 PTPRBP23467 1997 aa10.77□□□□□ -0.68
CAPN3-216ENST00000567071 NOTCH2Q04721 2471 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 DOPEY1Q5JWR5 2465 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 KIF26AQ9ULI4 1882 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-216ENST00000567071 DHX15O43143 795 aaKnown RBP10.77□□□□□ -0.69
CAPN3-216ENST00000567071 MYL4P12829 197 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 GNAQP50148 359 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 AMPD2Q01433 879 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 ITPRIPL2Q3MIP1 535 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 MTERF2Q49AM1 385 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 TAF1BQ53T94 588 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-216ENST00000567071 LMBRD2Q68DH5 695 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-216ENST00000567071 NOTUMQ6P988 496 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 SLC23A3Q6PIS1 610 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 TOGARAM2Q6ZUX3 1019 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 LPCAT2Q7L5N7 544 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 TEX2Q8IWB9 1127 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 FAM181AQ8N9Y4 354 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 CEP76Q8TAP6 659 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 CCDC51Q96ER9 411 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 ZNF512Q96ME7 567 aaPredicted RBP10.77□□□□□ -0.69
CAPN3-216ENST00000567071 ANO3Q9BYT9 981 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 PRORYQ9H606 182 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 ASAH2Q9NR71 780 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 MIOSQ9NXC5 875 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 MTRRQ9UBK8 725 aa10.77□□□□□ -0.69
CAPN3-216ENST00000567071 NRG2O14511 850 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-216ENST00000567071 TNFRSF10BO14763 440 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 EIF5BO60841 1220 aaKnown RBP10.76□□□□□ -0.69
CAPN3-216ENST00000567071 AXLP30530 894 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 HOXD12P35452 270 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 CCR2P41597 374 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 SETQ01105 290 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-216ENST00000567071 DMC1Q14565 340 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 FBXO43Q4G163 708 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 TMEM196Q5HYL7 178 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 SYT13Q7L8C5 426 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 HEATR3Q7Z4Q2 680 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 RABEPKQ7Z6M1 372 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 TSTD1Q8NFU3 115 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 PGBD1Q96JS3 809 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 SPACA7Q96KW9 195 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 C22orf23Q9BZE7 217 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 POLMQ9NP87 494 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-216ENST00000567071 THG1LQ9NWX6 298 aaKnown RBP10.76□□□□□ -0.69
CAPN3-216ENST00000567071 MBD1Q9UIS9 605 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-216ENST00000567071 TPCN1Q9ULQ1 816 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 SLC6A14Q9UN76 642 aa10.76□□□□□ -0.69
CAPN3-216ENST00000567071 RBM8AQ9Y5S9 174 aaKnown RBP10.76□□□□□ -0.69
CAPN3-216ENST00000567071 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms