RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 ZNF574Q6ZN55 896 aaPredicted RBP6.8□□□□□ -1.32
KARS-208ENST00000566772 BEND5Q7L4P6 421 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 FAM90A1Q86YD7 464 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 WFDC3Q8IUB2 231 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 BCL6BQ8N143 479 aaPredicted RBP6.8□□□□□ -1.32
KARS-208ENST00000566772 DTX3Q8N9I9 347 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 C1orf131Q8NDD1 294 aaKnown RBP6.8□□□□□ -1.32
KARS-208ENST00000566772 PIK3C3Q8NEB9 887 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 CYFIP2Q96F07 1278 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 SEC62Q99442 399 aaKnown RBP6.8□□□□□ -1.32
KARS-208ENST00000566772 SLC26A6Q9BXS9 759 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 UACAQ9BZF9 1416 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 SERHLQ9NQF3 203 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 ARHGAP20Q9P2F6 1191 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 CCDC39Q9UFE4 941 aa6.8□□□□□ -1.32
KARS-208ENST00000566772 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.8□□□□□ -1.32
KARS-208ENST00000566772 TEX14Q8IWB6 1497 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 HECW2Q9P2P5 1572 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 TRIM43BA6NCK2 446 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 TISP43B9A030 160 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 B9A039 149 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 BTN3A1O00481 513 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 HNRNPDLO14979 420 aaKnown RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 IRAK2O43187 625 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 MAFO75444 373 aaPredicted RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 MT-ND5P03915 603 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 ANXA2P07355 339 aaKnown RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 IFIT1P09914 478 aaKnown RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 FTH1P19P0C7X4 201 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 MYL4P12829 197 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 DDCP20711 480 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 AFMP43652 599 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 SOX8P57073 446 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 ERVFRD-1P60508 538 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 NKX3-2P78367 333 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 ATP8B2P98198 1209 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 EXOSC9Q06265 439 aaKnown RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 NR1I3Q14994 352 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 MAN2A1Q16706 1144 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 TIGD6Q17RP2 521 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 MSMPQ1L6U9 139 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 CCDC93Q567U6 631 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 C19orf54Q5BKX5 351 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 RRAGBQ5VZM2 374 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 CNKSR3Q6P9H4 555 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 CD300LDQ6UXZ3 194 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 TBC1D1Q86TI0 1168 aaPredicted RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 OR6B3Q8NGW1 331 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 SLC30A5Q8TAD4 765 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 ASB12Q8WXK4 309 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 TNPO1Q92973 898 aaKnown RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 TRIM43Q96BQ3 446 aaPredicted RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 UHRF1Q96T88 793 aaPredicted RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 GDF15Q99988 308 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 OSBPL6Q9BZF3 934 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 OSBPL5Q9H0X9 879 aaPredicted RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 SMURF2Q9HAU4 748 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 JADE2Q9NQC1 790 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 IGSF9Q9P2J2 1179 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 SAE1Q9UBE0 346 aaPredicted RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 ITGB1BP2Q9UKP3 347 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 PLA2G2DQ9UNK4 145 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 EPRSP07814 1512 aaKnown RBP6.79□□□□□ -1.32
KARS-208ENST00000566772 KIAA0556O60303 1618 aa6.79□□□□□ -1.32
KARS-208ENST00000566772 CTTNBP2Q8WZ74 1663 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 DISP1Q96F81 1524 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 THAP12O43422 761 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 TBC1D4O60343 1298 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 GAAP10253 952 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 CAPN3P20807 821 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 MAP3K12Q12852 859 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 ADAM9Q13443 819 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 PTK2BQ14289 1009 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 RAB3GAP1Q15042 981 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 GJC2Q5T442 439 aaPredicted RBP6.78□□□□□ -1.32
KARS-208ENST00000566772 GRAMD4Q6IC98 578 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 MZT2BQ6NZ67 158 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 UNC13DQ70J99 1090 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 TMTC1Q8IUR5 882 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 FANCBQ8NB91 859 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 NGDNQ8NEJ9 315 aaKnown RBP6.78□□□□□ -1.32
KARS-208ENST00000566772 FBXO18Q8NFZ0 1043 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 OR7D4Q8NG98 312 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 IPO4Q8TEX9 1081 aaKnown RBP6.78□□□□□ -1.32
KARS-208ENST00000566772 STYXQ8WUJ0 223 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 DDX11Q96FC9 970 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 CCDC120Q96HB5 630 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 WDR92Q96MX6 357 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 DPH1Q9BZG8 443 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 BCO1Q9HAY6 547 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 ALG13Q9NP73 1137 aaKnown RBP6.78□□□□□ -1.32
KARS-208ENST00000566772 DLL4Q9NR61 685 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 TM7SF3Q9NS93 570 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 AJAP1Q9UKB5 411 aaPredicted RBP6.78□□□□□ -1.32
KARS-208ENST00000566772 HDAC9Q9UKV0 1011 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
KARS-208ENST00000566772 UHRF1BP1LA0JNW5 1464 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms