RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 GRASPQ7Z6J2 395 aaPredicted RBP22.02■■□□□ 1.12
CLN6-207ENST00000566347 MYCT1Q8N699 235 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 RAD54LQ92698 747 aa22.02■■□□□ 1.12
CLN6-207ENST00000566347 C18orf25Q96B23 403 aaPredicted RBP22.02■■□□□ 1.12
CLN6-207ENST00000566347 CCL16O15467 120 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 MEFVO15553 781 aaPredicted RBP22.01■■□□□ 1.11
CLN6-207ENST00000566347 CLTAP09496 248 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 LIG4P49917 911 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 GRIN1Q05586 938 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 MCM6Q14566 821 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 SEZ6Q53EL9 994 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 VARS2Q5ST30 1063 aaKnown RBP22.01■■□□□ 1.11
CLN6-207ENST00000566347 SLC8B1Q6J4K2 584 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 RSPO2Q6UXX9 243 aaPredicted RBP22.01■■□□□ 1.11
CLN6-207ENST00000566347 LRRC15Q8TF66 581 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 CCSER1Q9C0I3 900 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 TBX20Q9UMR3 447 aa22.01■■□□□ 1.11
CLN6-207ENST00000566347 H7C4K7 107 aa22■■□□□ 1.11
CLN6-207ENST00000566347 K7ENM7 598 aa22■■□□□ 1.11
CLN6-207ENST00000566347 HNRNPDLO14979 420 aaKnown RBP22■■□□□ 1.11
CLN6-207ENST00000566347 GALR2O43603 387 aaPredicted RBP22■■□□□ 1.11
CLN6-207ENST00000566347 TBCAO75347 108 aaKnown RBP22■■□□□ 1.11
CLN6-207ENST00000566347 SLC44A3Q8N4M1 653 aa22■■□□□ 1.11
CLN6-207ENST00000566347 TMEM105Q8N8V8 129 aa22■■□□□ 1.11
CLN6-207ENST00000566347 RSAD2Q8WXG1 361 aa22■■□□□ 1.11
CLN6-207ENST00000566347 LARP4BQ92615 738 aaKnown RBP22■■□□□ 1.11
CLN6-207ENST00000566347 WNT16Q9UBV4 365 aa22■■□□□ 1.11
CLN6-207ENST00000566347 POLIQ9UNA4 740 aa22■■□□□ 1.11
CLN6-207ENST00000566347 DOCK6Q96HP0 2047 aa22■■□□□ 1.11
CLN6-207ENST00000566347 ANHXE9PGG2 379 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 TRAK2O60296 914 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 PIGRP01833 764 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 CXCL8P10145 99 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 SRFP11831 508 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 MCM4P33991 863 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 HTR4Q13639 388 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 FLCNQ8NFG4 579 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 ZNF461Q8TAF7 563 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 INTS4Q96HW7 963 aaKnown RBP21.99■■□□□ 1.11
CLN6-207ENST00000566347 SUSD3Q96L08 255 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 CDH7Q9ULB5 785 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 CLIC4Q9Y696 253 aa21.99■■□□□ 1.11
CLN6-207ENST00000566347 TTC26A0AVF1 554 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 NARSO43776 548 aaKnown RBP21.98■■□□□ 1.11
CLN6-207ENST00000566347 DDIT3P35638 169 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 ROR1Q01973 937 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 PPP2R3AQ06190 1150 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 SIX5Q8N196 739 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 APPL2Q8NEU8 664 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 TSPAN18Q96SJ8 248 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 HAPLN2Q9GZV7 340 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 ZHX3Q9H4I2 956 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 CCDC39Q9UFE4 941 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 TUBGCP4Q9UGJ1 667 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 KCNH3Q9ULD8 1083 aa21.98■■□□□ 1.11
CLN6-207ENST00000566347 OGTO15294 1046 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 XPOTO43592 962 aaKnown RBP21.97■■□□□ 1.11
CLN6-207ENST00000566347 TBC1D4O60343 1298 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 ABLIM3O94929 683 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 CFHP08603 1231 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 AOC1P19801 751 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 CYP3A5P20815 502 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 SYT1P21579 422 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 ELF1P32519 619 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 NTHL1P78549 312 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 MRPL58Q14197 206 aaKnown RBP21.97■■□□□ 1.11
CLN6-207ENST00000566347 PTPAQ15257 358 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 PABPC1LQ4VXU2 614 aaKnown RBP21.97■■□□□ 1.11
CLN6-207ENST00000566347 CWF19L1Q69YN2 538 aaKnown RBP21.97■■□□□ 1.11
CLN6-207ENST00000566347 MTSS1LQ765P7 747 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 KRI1Q8N9T8 703 aaKnown RBP21.97■■□□□ 1.11
CLN6-207ENST00000566347 KIF12Q96FN5 646 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 RTP3Q9BQQ7 232 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 STK17AQ9UEE5 414 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 UBQLN1Q9UMX0 589 aaKnown RBP21.97■■□□□ 1.11
CLN6-207ENST00000566347 SRPRBQ9Y5M8 271 aaKnown RBP21.97■■□□□ 1.11
CLN6-207ENST00000566347 NUMBLQ9Y6R0 609 aa21.97■■□□□ 1.11
CLN6-207ENST00000566347 ARHGEF37A1IGU5 675 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 NPR3P17342 541 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 MARCKSP29966 332 aaPredicted RBP21.96■■□□□ 1.11
CLN6-207ENST00000566347 LRPAP1P30533 357 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 TXLNAP40222 546 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 GTF2BQ00403 316 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 RESTQ13127 1097 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 CTXN3Q4LDR2 81 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 ZNF280DQ6N043 979 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 ATOH1Q92858 354 aaPredicted RBP21.96■■□□□ 1.11
CLN6-207ENST00000566347 FGF13Q92913 245 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 EPSTI1Q96J88 318 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 MSTO1Q9BUK6 570 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 BACH2Q9BYV9 841 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 RPF1Q9H9Y2 349 aaKnown RBP21.96■■□□□ 1.11
CLN6-207ENST00000566347 FBXO2Q9UK22 296 aaPredicted RBP21.96■■□□□ 1.11
CLN6-207ENST00000566347 FBXL5Q9UKA1 691 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 PCDHB8Q9UN66 801 aa21.96■■□□□ 1.11
CLN6-207ENST00000566347 A0A0B4J269 797 aa21.95■■□□□ 1.1
CLN6-207ENST00000566347 WDR27A2RRH5 827 aa21.95■■□□□ 1.1
CLN6-207ENST00000566347 PRRG1O14668 218 aa21.95■■□□□ 1.1
CLN6-207ENST00000566347 FAM189A1O60320 539 aa21.95■■□□□ 1.1
CLN6-207ENST00000566347 LRG1P02750 347 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms