RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CLDN3O15551 220 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 BMP15O95972 392 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 CFHP08603 1231 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 PLCG1P19174 1290 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 MCM6Q14566 821 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 KARSQ15046 597 aaKnown RBP20.01■□□□□ 0.79
USB1-213ENST00000566292 UVSSAQ2YD98 709 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 VARS2Q5ST30 1063 aaKnown RBP20.01■□□□□ 0.79
USB1-213ENST00000566292 SIX5Q8N196 739 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 HCFC1R1Q9NWW0 138 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 POLIQ9UNA4 740 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 ANK1P16157 1881 aa20.01■□□□□ 0.79
USB1-213ENST00000566292 VPS37CA5D8V6 355 aaPredicted RBP20■□□□□ 0.79
USB1-213ENST00000566292 KRBA1A5PL33 1030 aa20■□□□□ 0.79
USB1-213ENST00000566292 H0YCG3 227 aa20■□□□□ 0.79
USB1-213ENST00000566292 PI15O43692 258 aa20■□□□□ 0.79
USB1-213ENST00000566292 TBC1D4O60343 1298 aa20■□□□□ 0.79
USB1-213ENST00000566292 XYLBO75191 536 aa20■□□□□ 0.79
USB1-213ENST00000566292 POU2F2P09086 479 aa20■□□□□ 0.79
USB1-213ENST00000566292 CXCL8P10145 99 aa20■□□□□ 0.79
USB1-213ENST00000566292 RPL9P32969 192 aaKnown RBP20■□□□□ 0.79
USB1-213ENST00000566292 LONP1P36776 959 aaKnown RBP20■□□□□ 0.79
USB1-213ENST00000566292 ZNF131P52739 623 aa20■□□□□ 0.79
USB1-213ENST00000566292 ROR1Q01973 937 aa20■□□□□ 0.79
USB1-213ENST00000566292 SLC8B1Q6J4K2 584 aa20■□□□□ 0.79
USB1-213ENST00000566292 ITFG1Q8TB96 612 aa20■□□□□ 0.79
USB1-213ENST00000566292 RAD54LQ92698 747 aa20■□□□□ 0.79
USB1-213ENST00000566292 DNMT3BQ9UBC3 853 aaKnown RBP20■□□□□ 0.79
USB1-213ENST00000566292 WNT16Q9UBV4 365 aa20■□□□□ 0.79
USB1-213ENST00000566292 TUBGCP4Q9UGJ1 667 aa20■□□□□ 0.79
USB1-213ENST00000566292 NUMBLQ9Y6R0 609 aa20■□□□□ 0.79
USB1-213ENST00000566292 WDR27A2RRH5 827 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 SYN3O14994 580 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 FAM13AO94988 1023 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 SRFP11831 508 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 AOC1P19801 751 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 TNFSF9P41273 254 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 MATR3P43243 847 aaKnown RBP eCLIP19.99■□□□□ 0.79
USB1-213ENST00000566292 SPAG1Q07617 926 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 MRPL58Q14197 206 aaKnown RBP19.99■□□□□ 0.79
USB1-213ENST00000566292 RTL10Q7L3V2 364 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 ATOH1Q92858 354 aaPredicted RBP19.99■□□□□ 0.79
USB1-213ENST00000566292 BICD1Q96G01 975 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 SUSD3Q96L08 255 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 RPP25Q9BUL9 199 aaKnown RBP19.99■□□□□ 0.79
USB1-213ENST00000566292 CDH7Q9ULB5 785 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 TBX20Q9UMR3 447 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 NUB1Q9Y5A7 615 aa19.99■□□□□ 0.79
USB1-213ENST00000566292 ZFP37Q9Y6Q3 630 aaPredicted RBP19.99■□□□□ 0.79
USB1-213ENST00000566292 MYO15AQ9UKN7 3530 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 TTC26A0AVF1 554 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 FAM189A1O60320 539 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 ABLIM3O94929 683 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 PTPAQ15257 358 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 ZBTB41Q5SVQ8 909 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 PARM1Q6UWI2 310 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 MYCT1Q8N699 235 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 ZNF461Q8TAF7 563 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 FGF13Q92913 245 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 FGF14Q92915 247 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 FIZ1Q96SL8 496 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 IRF2BPLQ9H1B7 796 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 PARVGQ9HBI0 331 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 CA14Q9ULX7 337 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 CLIC4Q9Y696 253 aa19.98■□□□□ 0.79
USB1-213ENST00000566292 K7ENM7 598 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 PIGRP01833 764 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 CLTAP09496 248 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 LIG4P49917 911 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 SPECC1Q5M775 1068 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 USP49Q70CQ1 688 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 RASSF8Q8NHQ8 419 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 GPR152Q8TDT2 470 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 LARP4BQ92615 738 aaKnown RBP19.97■□□□□ 0.79
USB1-213ENST00000566292 EPSTI1Q96J88 318 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 CCSER1Q9C0I3 900 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 PLEKHA5Q9HAU0 1116 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 FBXL5Q9UKA1 691 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 DMDP11532 3685 aa19.97■□□□□ 0.79
USB1-213ENST00000566292 ZFHX2Q9C0A1 2572 aaPredicted RBP19.96■□□□□ 0.79
USB1-213ENST00000566292 ARHGEF37A1IGU5 675 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 H7C4K7 107 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 HNRNPDLO14979 420 aaKnown RBP19.96■□□□□ 0.79
USB1-213ENST00000566292 TRAK2O60296 914 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 MCM4P33991 863 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 ARPP19P56211 112 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 RESTQ13127 1097 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 ZBTB6Q15916 424 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 ENOX2Q16206 610 aaKnown RBP19.96■□□□□ 0.79
USB1-213ENST00000566292 PABPC1LQ4VXU2 614 aaKnown RBP19.96■□□□□ 0.79
USB1-213ENST00000566292 SLC39A4Q6P5W5 647 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 DDX12PQ92771 950 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 RTP3Q9BQQ7 232 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 SLC2A4RGQ9NR83 387 aa19.96■□□□□ 0.79
USB1-213ENST00000566292 COL4A3Q01955 1670 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 LACTBL1A8MY62 500 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 OGTO15294 1046 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 SEC24AO95486 1093 aa19.95■□□□□ 0.78
USB1-213ENST00000566292 KRT18P05783 430 aaKnown RBP19.95■□□□□ 0.78
USB1-213ENST00000566292 ATF2P15336 505 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms