RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 UMODL1Q5DID0 1318 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 ABLIM1O14639 778 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 FAM189A1O60320 539 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 MFAP3P55082 362 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 PTENP60484 403 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 MAPK6Q16659 721 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 TMEM31Q5JXX7 168 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 CRELD2Q6UXH1 353 aaPredicted RBP18.09■□□□□ 0.49
RAB40C-210ENST00000566290 TSHZ1Q6ZSZ6 1077 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 RSRC2Q7L4I2 434 aaKnown RBP18.09■□□□□ 0.49
RAB40C-210ENST00000566290 TRMT1LQ7Z2T5 733 aaKnown RBP18.09■□□□□ 0.49
RAB40C-210ENST00000566290 ZNF572Q7Z3I7 529 aaPredicted RBP18.09■□□□□ 0.49
RAB40C-210ENST00000566290 TRIM50Q86XT4 487 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 BRSK2Q8IWQ3 736 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 FAM71AQ8IYT1 594 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 FAXDC2Q96IV6 333 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 NT5C1BQ96P26 610 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 CGRRF1Q99675 332 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 C16orf70Q9BSU1 422 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 TRMT13Q9NUP7 481 aaKnown RBP18.09■□□□□ 0.49
RAB40C-210ENST00000566290 RAB20Q9NX57 234 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 TRIM10Q9UDY6 481 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 ADAMTS1Q9UHI8 967 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 TRPC6Q9Y210 931 aa18.09■□□□□ 0.49
RAB40C-210ENST00000566290 MROH7Q68CQ1 1323 aa18.08■□□□□ 0.49
RAB40C-210ENST00000566290 ACKR2O00590 384 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 TIMP1P01033 207 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 TUBBP07437 444 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 ZNF286BP0CG31 522 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 TCP1P17987 556 aaKnown RBP18.08■□□□□ 0.48
RAB40C-210ENST00000566290 CHMP4BP1P59074 171 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 CDC42EP1Q00587 391 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 ALKBH5Q6P6C2 394 aaKnown RBP18.08■□□□□ 0.48
RAB40C-210ENST00000566290 SV2AQ7L0J3 742 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 ZNF710Q8N1W2 664 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 ZSWIM2Q8NEG5 633 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 HELQQ8TDG4 1101 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 RABGGTAQ92696 567 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 ACO2Q99798 780 aaKnown RBP18.08■□□□□ 0.48
RAB40C-210ENST00000566290 MSTO1Q9BUK6 570 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 PPP1R12CQ9BZL4 782 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 PTPRHQ9HD43 1115 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 C11orf16Q9NQ32 467 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 PRMT7Q9NVM4 692 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-210ENST00000566290 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-210ENST00000566290 RNF14Q9UBS8 474 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 SAR1BQ9Y6B6 198 aa18.08■□□□□ 0.48
RAB40C-210ENST00000566290 GOLGA8IPA6NC78 632 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 GOLGA8JA6NMD2 632 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 DDX3XO00571 662 aaKnown RBP eCLIP18.07■□□□□ 0.482e-7■■■■■ 28.9
RAB40C-210ENST00000566290 CES2O00748 559 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 OGTO15294 1046 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 PRKCBP05771 671 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 ACRP10323 421 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 HADHBP55084 474 aaKnown RBP18.07■□□□□ 0.48
RAB40C-210ENST00000566290 CKAP4Q07065 602 aaKnown RBP18.07■□□□□ 0.48
RAB40C-210ENST00000566290 PCBP1Q15365 356 aaKnown RBP eCLIP18.07■□□□□ 0.48
RAB40C-210ENST00000566290 DGKDQ16760 1214 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 KYAT1Q16773 422 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 FNBP1Q96RU3 617 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 FAM213AQ9BRX8 229 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 TARS2Q9BW92 718 aaKnown RBP18.07■□□□□ 0.48
RAB40C-210ENST00000566290 CARD6Q9BX69 1037 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 TSPYL2Q9H2G4 693 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-210ENST00000566290 NKX2-4Q9H2Z4 354 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 CHD7Q9P2D1 2997 aa18.07■□□□□ 0.48
RAB40C-210ENST00000566290 CNTNAP2Q9UHC6 1331 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 RRN3P2A6NIE6 340 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 CLDN3O15551 220 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 KPNA6O60684 536 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 H2AFZP0C0S5 128 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 TMEM253P0C7T8 217 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 CYP2C9P11712 490 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 GZMAP12544 262 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 INSRRP14616 1297 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 TMOD1P28289 359 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 CYP2C18P33260 490 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 PHKA2P46019 1235 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 DRP2Q13474 957 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 KIAA0753Q2KHM9 967 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 FAM47CQ5HY64 1035 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 MFSD5Q6N075 450 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 GJB7Q6PEY0 223 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 MPZL3Q6UWV2 235 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 H2AFVQ71UI9 128 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 ARHGEF19Q8IW93 802 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 MICALL1Q8N3F8 863 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 RNF149Q8NC42 400 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 UBXN4Q92575 508 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 GOLGA1Q92805 767 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 KHSRPQ92945 711 aaKnown RBP eCLIP18.06■□□□□ 0.48
RAB40C-210ENST00000566290 HAPLN2Q9GZV7 340 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 RBAKQ9NYW8 714 aaPredicted RBP18.06■□□□□ 0.48
RAB40C-210ENST00000566290 SNX12Q9UMY4 172 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 TNFSF13BQ9Y275 285 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 CAPN6Q9Y6Q1 641 aa18.06■□□□□ 0.48
RAB40C-210ENST00000566290 FAM86C2PA6NEL3 165 aa18.05■□□□□ 0.48
RAB40C-210ENST00000566290 TLR3O15455 904 aaKnown RBP18.05■□□□□ 0.48
RAB40C-210ENST00000566290 F2P00734 622 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms