RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 SYCP3Q8IZU3 236 aa15.05■□□□□ -0
HERPUD1-210ENST00000565966 HASPINQ8TF76 798 aa15.05■□□□□ -0
HERPUD1-210ENST00000565966 POMGNT1Q8WZA1 660 aa15.05■□□□□ -0
HERPUD1-210ENST00000565966 TSPAN18Q96SJ8 248 aa15.05■□□□□ -0
HERPUD1-210ENST00000565966 UHRF1Q96T88 793 aaPredicted RBP15.05■□□□□ -0
HERPUD1-210ENST00000565966 GOLGA2P5Q9HBQ8 144 aa15.05■□□□□ -0
HERPUD1-210ENST00000565966 CPSF3Q9UKF6 684 aaKnown RBP15.05■□□□□ -0
HERPUD1-210ENST00000565966 AGO2Q9UKV8 859 aaKnown RBP15.05■□□□□ -0
HERPUD1-210ENST00000565966 LACTBL1A8MY62 500 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 TRAPPC3O43617 180 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 ADRB2P07550 413 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 HOXB8P17481 243 aaPredicted RBP15.04■□□□□ -0
HERPUD1-210ENST00000565966 POU5F1Q01860 360 aaKnown RBP15.04■□□□□ -0
HERPUD1-210ENST00000565966 STK4Q13043 487 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 PSMD2Q13200 908 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 ENOX2Q16206 610 aaKnown RBP15.04■□□□□ -0
HERPUD1-210ENST00000565966 FAM171A1Q5VUB5 890 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 ANKRD54Q6NXT1 300 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 SMRP1Q8NCR6 262 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 SLC22A17Q8WUG5 538 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 SCFD1Q8WVM8 642 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 CCDC34Q96HJ3 373 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 TIGD1Q96MW7 591 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 RXFP1Q9HBX9 757 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.04■□□□□ -0
HERPUD1-210ENST00000565966 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.04■□□□□ -0
HERPUD1-210ENST00000565966 C5orf42Q9H799 3197 aa15.04■□□□□ -0
HERPUD1-210ENST00000565966 UBE4BO95155 1302 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 PODXLO00592 558 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 XPOTO43592 962 aaKnown RBP15.03■□□□□ -0
HERPUD1-210ENST00000565966 PRPF40AO75400 957 aaKnown RBP15.03■□□□□ -0
HERPUD1-210ENST00000565966 RHOBTB3O94955 611 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 LDHAP00338 332 aaKnown RBP15.03■□□□□ -0
HERPUD1-210ENST00000565966 ADH1AP07327 375 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 CYP3A5P20815 502 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 GARTP22102 1010 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 ACOT2P49753 483 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 UBE2HP62256 183 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 PNOCQ13519 176 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 SMAD2Q15796 467 aaKnown RBP15.03■□□□□ -0
HERPUD1-210ENST00000565966 ZBTB6Q15916 424 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 SYCE2Q6PIF2 218 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 CD300LGQ6UXG3 332 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 CEP57Q86XR8 500 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 NELFCDQ8IXH7 590 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 KIAA0895Q8NCT3 520 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 RIN2Q8WYP3 895 aaPredicted RBP15.03■□□□□ -0
HERPUD1-210ENST00000565966 C18orf25Q96B23 403 aaPredicted RBP15.03■□□□□ -0
HERPUD1-210ENST00000565966 KIF12Q96FN5 646 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 B3GALT6Q96L58 329 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 CBWD1Q9BRT8 395 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 TTPALQ9BTX7 342 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 FNIP2Q9P278 1114 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 UBQLN1Q9UMX0 589 aaKnown RBP15.03■□□□□ -0
HERPUD1-210ENST00000565966 SCN1AP35498 2009 aa15.03■□□□□ -0
HERPUD1-210ENST00000565966 C2orf16Q68DN1 1984 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 TEX28O15482 410 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 EPCAMP16422 314 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 IGFBP6P24592 240 aaPredicted RBP15.02■□□□□ -0
HERPUD1-210ENST00000565966 CLCN4P51793 760 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 CREMQ03060 361 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 SPAG1Q07617 926 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 KCNB1Q14721 858 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 BMT2Q1RMZ1 405 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 RTP2Q5QGT7 225 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 PDXDC1Q6P996 788 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 CRELD2Q6UXH1 353 aaPredicted RBP15.02■□□□□ -0
HERPUD1-210ENST00000565966 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.02■□□□□ -0
HERPUD1-210ENST00000565966 C3orf58Q8NDZ4 430 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 ZSWIM2Q8NEG5 633 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 CCDC47Q96A33 483 aaKnown RBP15.02■□□□□ -0
HERPUD1-210ENST00000565966 FAM212AQ96EL1 285 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 NECAB3Q96P71 396 aaPredicted RBP15.02■□□□□ -0
HERPUD1-210ENST00000565966 S1PR5Q9H228 398 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 ASB7Q9H672 318 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 DZANK1Q9NVP4 752 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 PRKAG3Q9UGI9 489 aa15.02■□□□□ -0
HERPUD1-210ENST00000565966 MYO10Q9HD67 2058 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 TGFB1I1O43294 461 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 C1RP00736 705 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 FGFR3P22607 806 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 LRPAP1P30533 357 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 BRCC3P46736 316 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 ARMCX5Q6P1M9 558 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 ELOA2Q8IYF1 753 aaPredicted RBP15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 LNX1Q8TBB1 728 aaPredicted RBP15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 PIK3R5Q8WYR1 880 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 SAAL1Q96ER3 474 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 PCIF1Q9H4Z3 704 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 TUBGCP4Q9UGJ1 667 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 DPP7Q9UHL4 492 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 DERAQ9Y315 318 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 NUB1Q9Y5A7 615 aa15.01□□□□□ -0.01
HERPUD1-210ENST00000565966 GOLGA8IPA6NC78 632 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 GOLGA8JA6NMD2 632 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 TNFRSF10AO00220 468 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 KIAA0391O15091 583 aaKnown RBP15□□□□□ -0.01
HERPUD1-210ENST00000565966 ITIH3Q06033 890 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 PSMD5Q16401 504 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 671.9 ms