RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-215ENST00000565559 MIOSQ9NXC5 875 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 GPSM3Q9Y4H4 160 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 AKAP13Q12802 2813 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 SDK1Q7Z5N4 2213 aa12.38□□□□□ -0.43
CAPN3-215ENST00000565559 SMG1Q96Q15 3661 aaKnown RBP12.38□□□□□ -0.43
CAPN3-215ENST00000565559 DMXL2Q8TDJ6 3036 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 HYAL3O43820 417 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-215ENST00000565559 EIF5BO60841 1220 aaKnown RBP12.37□□□□□ -0.43
CAPN3-215ENST00000565559 GAS7O60861 476 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 MICAL2O94851 1124 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 SRGAP2CP0DJJ0 459 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 AXLP30530 894 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 OR1D2P34982 312 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
CAPN3-215ENST00000565559 CREB5Q02930 508 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 PCBP1Q15365 356 aaKnown RBP eCLIP12.37□□□□□ -0.43
CAPN3-215ENST00000565559 RNF20Q5VTR2 975 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 CREB3L3Q68CJ9 461 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 VITQ6UXI7 678 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 MB21D2Q8IYB1 491 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-215ENST00000565559 FANCBQ8NB91 859 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 SLC7A3Q8WY07 619 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 RABGGTAQ92696 567 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 SMARCD2Q92925 531 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 ASB16Q96NS5 453 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 SH2D3AQ9BRG2 576 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 MKNK1Q9BUB5 465 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 SLC32A1Q9H598 525 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 TMEM9BQ9NQ34 198 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 HES2Q9Y543 173 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 DOCK6Q96HP0 2047 aa12.37□□□□□ -0.43
CAPN3-215ENST00000565559 SLC27A2O14975 620 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 ADAM12O43184 909 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 PRC1O43663 620 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 RHOBTB1O94844 696 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 CAVIN2O95810 425 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 COPS2P61201 443 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 SPIRE1Q08AE8 756 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 AMHR2Q16671 573 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 CYP4A22Q5TCH4 519 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 PDZD4Q76G19 769 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-215ENST00000565559 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 RDM1Q8NG50 284 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 PSPC1Q8WXF1 523 aaKnown RBP12.36□□□□□ -0.43
CAPN3-215ENST00000565559 CRYGNQ8WXF5 182 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 RIT2Q99578 217 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 CORO1BQ9BR76 489 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 TEKT3Q9BXF9 490 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 EIF2AQ9BY44 585 aaKnown RBP12.36□□□□□ -0.43
CAPN3-215ENST00000565559 SLC8A2Q9UPR5 921 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
CAPN3-215ENST00000565559 LNP1A1A4G5 178 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 WDR27A2RRH5 827 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 TMEM150BA6NC51 233 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 SLC38A8A6NNN8 435 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 SH2B2O14492 632 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-215ENST00000565559 KHNYNO15037 678 aaKnown RBP12.35□□□□□ -0.43
CAPN3-215ENST00000565559 ATG13O75143 517 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 ELF1P32519 619 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 MCM5P33992 734 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 PXNP49023 591 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-215ENST00000565559 FGD1P98174 961 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 TUSC3Q13454 348 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 COL28A1Q2UY09 1125 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 PLK5Q496M5 336 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 LRCH2Q5VUJ6 765 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-215ENST00000565559 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 MIER3Q7Z3K6 550 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 RALGPS2Q86X27 583 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-215ENST00000565559 MICU3Q86XE3 530 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 RAB11FIP4Q86YS3 637 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 MFSD6LQ8IWD5 586 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 GLIS3Q8NEA6 775 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 DEFB124Q8NES8 71 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
CAPN3-215ENST00000565559 MTRQ99707 1265 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 CSRNP2Q9H175 543 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 MINDY3Q9H8M7 445 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 BARHL2Q9NY43 387 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 KLK13Q9UKR3 277 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 TAF6LQ9Y6J9 622 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 WDFY3Q8IZQ1 3526 aa12.35□□□□□ -0.43
CAPN3-215ENST00000565559 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 H0Y626 953 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 PRRG1O14668 218 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 EXTL3O43909 919 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 KIF4AO95239 1232 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 TRIM16O95361 564 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 AKAP5P24588 427 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms