RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PODXLO00592 558 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
COMMD4-212ENST00000565517 ADH1AP07327 375 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 IL9P15248 144 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 CASP1P29466 404 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 LRPAP1P30533 357 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 ACOT2P49753 483 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 CLCN4P51793 760 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 TPRNQ4KMQ1 711 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 FAM171A1Q5VUB5 890 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 LLGL2Q6P1M3 1020 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 SYCE2Q6PIF2 218 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 CRELD2Q6UXH1 353 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-212ENST00000565517 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-212ENST00000565517 FSIP1Q8NA03 581 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 PIK3R5Q8WYR1 880 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 C18orf25Q96B23 403 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-212ENST00000565517 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 S1PR5Q9H228 398 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 IKZF4Q9H2S9 585 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 DZANK1Q9NVP4 752 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
COMMD4-212ENST00000565517 TEX28O15482 410 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 KLRC4O43908 158 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 FGFR3P22607 806 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 PSMD2Q13200 908 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 CLUL1Q15846 466 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 C3orf58Q8NDZ4 430 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 GLIS3Q8NEA6 775 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 RIN2Q8WYP3 895 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-212ENST00000565517 HPS3Q969F9 1004 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 B3GALT6Q96L58 329 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 DPP7Q9UHL4 492 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 C2CD2Q9Y426 696 aa16.77■□□□□ 0.28
COMMD4-212ENST00000565517 ZNF202O95125 648 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 IL18RAPO95256 599 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 EPCAMP16422 314 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 IGFBP6P24592 240 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-212ENST00000565517 HOXD13P35453 343 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
COMMD4-212ENST00000565517 ITIH3Q06033 890 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 RTP2Q5QGT7 225 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 SPATA1Q5VX52 437 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 KRBA2Q6ZNG9 492 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 LNX1Q8TBB1 728 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-212ENST00000565517 HDAC7Q8WUI4 952 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 SUSD6Q92537 303 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 FAM212AQ96EL1 285 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 TUBGCP4Q9UGJ1 667 aa16.76■□□□□ 0.27
COMMD4-212ENST00000565517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-212ENST00000565517 GOLGA6L4A6NEF3 574 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 EXTL3O43909 919 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 PAX3P23760 479 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
COMMD4-212ENST00000565517 SPAG1Q07617 926 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 TMEM132DQ14C87 1099 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 BMT2Q1RMZ1 405 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 JADE1Q6IE81 842 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 KANK3Q6NY19 840 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 ELMSAN1Q6PJG2 1045 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 CEP57Q86XR8 500 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 BEST2Q8NFU1 509 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 SCFD1Q8WVM8 642 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 CCDC34Q96HJ3 373 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 FBXL18Q96ME1 805 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 CBWD1Q9BRT8 395 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 ADAM7Q9H2U9 754 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 CGNQ9P2M7 1197 aaKnown RBP16.75■□□□□ 0.27
COMMD4-212ENST00000565517 USP15Q9Y4E8 981 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-212ENST00000565517 NUB1Q9Y5A7 615 aa16.75■□□□□ 0.27
COMMD4-212ENST00000565517 TTC28Q96AY4 2481 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 SYN3O14994 580 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 GLUD1P00367 558 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 BRCC3P46736 316 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 PSMD5Q16401 504 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 KMT5BQ4FZB7 885 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 CES5AQ6NT32 575 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 LILRA6Q6PI73 481 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 PRSS55Q6UWB4 352 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-212ENST00000565517 ANKS3Q6ZW76 656 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 BRSK2Q8IWQ3 736 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 ADHFE1Q8IWW8 467 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 GPD1LQ8N335 351 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 SUSD3Q96L08 255 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 NECAB3Q96P71 396 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-212ENST00000565517 CLSTN3Q9BQT9 956 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 FAM213AQ9BRX8 229 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 PLEKHA4Q9H4M7 779 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 KIAA1586Q9HCI6 787 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 SLC39A2Q9NP94 309 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 EXOC1Q9NV70 894 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 BACE2Q9Y5Z0 518 aa16.74■□□□□ 0.27
COMMD4-212ENST00000565517 TNFRSF10AO00220 468 aa16.73■□□□□ 0.27
COMMD4-212ENST00000565517 TGFB1I1O43294 461 aa16.73■□□□□ 0.27
COMMD4-212ENST00000565517 RPN1P04843 607 aaKnown RBP16.73■□□□□ 0.27
COMMD4-212ENST00000565517 NFICP08651 508 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms