RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 LCORLQ8N3X6 602 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 VPS33AQ96AX1 596 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 DDX50Q9BQ39 737 aaKnown RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 KIFC1Q9BW19 673 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SLC40A1Q9NP59 571 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 TTC7AQ9ULT0 858 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 INPP5FQ9Y2H2 1132 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 STARD13Q9Y3M8 1113 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 PNMA6FA0A0J9YX94 578 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 UBA6A0AVT1 1052 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 NEURL1BA8MQ27 555 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 TPP2P29144 1249 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 RGS4P49798 205 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 NCAPHQ15003 741 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 E4F1Q66K89 784 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 NUDT18Q6ZVK8 323 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 DPP10Q8N608 796 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 ENKURQ8TC29 256 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 RGS18Q9NS28 235 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CLDN3O15551 220 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 FKBP9O95302 570 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 BCL10O95999 233 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 TUBA4AP68366 448 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CDO1Q16878 200 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 FAM47AQ5JRC9 791 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 FKBP9P1Q75LS8 142 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 FRMD5Q7Z6J6 570 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 GAS2L3Q86XJ1 694 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 LARGE2Q8N3Y3 721 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 TIPINQ9BVW5 301 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 MMADHCQ9H3L0 296 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 C6orf203Q9P0P8 240 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 SPATA2Q9UM82 520 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 NCKAP5LQ9HCH0 1330 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 O00370 1275 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 KLHL41O60662 606 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SERPINB8P50452 374 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 ZFP1Q6P2D0 407 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 FAM180AQ6UWF9 173 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CCDC36Q8IYA8 594 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CYP4Z2PQ8N1L4 340 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SH3KBP1Q96B97 665 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 ACSBG1Q96GR2 724 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 HES6Q96HZ4 224 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SUCLG2Q96I99 432 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CHAMP1Q96JM3 812 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 DHX36Q9H2U1 1008 aaKnown RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 WDR19Q8NEZ3 1342 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 ANKRD65E5RJM6 399 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 M0R2C6 588 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 RRM2P31350 389 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 PIGHQ14442 188 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 TIMM50Q3ZCQ8 353 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SDE2Q6IQ49 451 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 MIGA2Q7L4E1 593 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CYP4Z1Q86W10 505 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 RBBP8NLQ8NC74 664 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 NSUN7Q8NE18 718 aaKnown RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 HNRNPLLQ8WVV9 542 aaKnown RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 ASIC4Q96FT7 647 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SERPINB12Q96P63 405 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SENP7Q9BQF6 1050 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 BDH2Q9BUT1 245 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CAAP1Q9H8G2 361 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 KLHL3Q9UH77 587 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 VAV3Q9UKW4 847 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 A8MXQ7 604 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 IGF2BP3O00425 579 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMG1-211ENST00000565324 TAF5LO75529 589 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 STX11O75558 287 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 POLBP06746 335 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 ATP6V1B1P15313 513 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 RGS2P41220 211 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 PTK6Q13882 451 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 RSBN1Q5VWQ0 802 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 PLEKHA7Q6IQ23 1121 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 CHMP1BQ7LBR1 199 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 MAP4K1Q92918 833 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 NARS2Q96I59 477 aaKnown RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 TRIM51Q9BSJ1 452 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 MSTO1Q9BUK6 570 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SNX12Q9UMY4 172 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 DTNAQ9Y4J8 743 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 MYH11P35749 1972 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 LRRC53A6NM62 1247 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 APOL1O14791 398 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 PHF2O75151 1096 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 GNA15P30679 374 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 SLFN13Q68D06 897 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 LRRC47Q8N1G4 583 aaKnown RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 PPP2R3CQ969Q6 453 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 JAG2Q9Y219 1238 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.33□□□□□ -1.56
SMG1-211ENST00000565324 GJA3Q9Y6H8 435 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 COPB2P35606 906 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 COX10Q12887 443 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 ZNF235Q14590 738 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 NDUFAF6Q330K2 333 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 MZT2BQ6NZ67 158 aa5.33□□□□□ -1.56
SMG1-211ENST00000565324 NLRP10Q86W26 655 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms