RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ZNF449Q6P9G9 518 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 APTXQ7Z2E3 356 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 RNF135Q8IUD6 432 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 REM2Q8IYK8 340 aaPredicted RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 FITM2Q8N6M3 262 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF579Q8NAF0 562 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 OR10Z1Q8NGY1 313 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 EXD1Q8NHP7 514 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF420Q8TAQ5 688 aaPredicted RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 SPATA20Q8TB22 786 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 CKAP2Q8WWK9 683 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 JADE3Q92613 823 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ARHGEF2Q92974 986 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 FBXW7Q969H0 707 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 METTL2AQ96IZ6 378 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 MAGEB18Q96M61 343 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 NOX5Q96PH1 765 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 SECISBP2Q96T21 854 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 CCDC77Q9BR77 488 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ERP44Q9BS26 406 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 DENND2DQ9H6A0 471 aaPredicted RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 IFT22Q9H7X7 185 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 MARCH7Q9H992 704 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 LIN7BQ9HAP6 207 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF287Q9HBT7 754 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 MAGEE1Q9HCI5 957 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 TAS2R7Q9NYW3 318 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 UBA2Q9UBT2 640 aaPredicted RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 CNOT8Q9UFF9 292 aaKnown RBP6.64□□□□□ -1.35
PTPN9-204ENST00000564970 PCDHA12Q9UN75 941 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 SPEF1Q9Y4P9 236 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 PCDHGA11Q9Y5H2 935 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ACEP12821 1306 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 SALL1Q9NSC2 1324 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 CARMIL3Q8ND23 1372 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 NCAPD2Q15021 1401 aa6.64□□□□□ -1.35
PTPN9-204ENST00000564970 ILVBLA1L0T0 632 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 ARHGEF35A5YM69 484 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 ZNF839A8K0R7 811 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 A8MUI8 341 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 H0Y3Z8 333 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 H3BRJ5 948 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 APOL1O14791 398 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 POLR1CO15160 346 aaPredicted RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 ADCY6O43306 1168 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 ICMTO60725 284 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PLCH2O75038 1416 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 TMCC2O75069 709 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 SIN3BO75182 1162 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 FOSP01100 380 aaPredicted RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 FAM228BP0C875 321 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PCNAP12004 261 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 COL6A1P12109 1028 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 MYH7P12883 1935 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 SCG2P13521 617 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 SYN1P17600 705 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 DDX5P17844 614 aaKnown RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 CD53P19397 219 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 JAK1P23458 1154 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PSMA4P25789 261 aaKnown RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 RPL9P32969 192 aaKnown RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PTGS2P35354 604 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PSMC2P35998 433 aaKnown RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PPP1R2P41236 205 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PRCPP42785 496 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 C21orf59P57076 290 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PPP2R2BQ00005 443 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 MST1RQ04912 1400 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 SCRN3Q0VDG4 424 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 GRSF1Q12849 480 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 NR1H3Q13133 447 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 LAPTM5Q13571 262 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 GNA13Q14344 377 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 FRMPD4Q14CM0 1322 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PPP2R5BQ15173 497 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 KCNJ8Q15842 424 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 TMEM266Q2M3C6 531 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 FBXO43Q4G163 708 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 ZC2HC1CQ53FD0 456 aaPredicted RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 TJAP1Q5JTD0 557 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 RBM20Q5T481 1227 aaKnown RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 BEND3Q5T5X7 828 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 AGAP7PQ5VUJ5 663 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 DCLRE1AQ6PJP8 1040 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 TPTE2Q6XPS3 522 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 RBM44Q6ZP01 1051 aaKnown RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 RFPL4BQ6ZWI9 263 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 CYP4V2Q6ZWL3 525 aaPredicted RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 MIGA2Q7L4E1 593 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 PEX26Q7Z412 305 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 TMC3Q7Z5M5 1100 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 NME9Q86XW9 330 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 CLVS1Q8IUQ0 354 aaPredicted RBP6.63□□□□□ -1.35
PTPN9-204ENST00000564970 TRIM59Q8IWR1 403 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 KIF2BQ8N4N8 673 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 AADATQ8N5Z0 425 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 NECAB1Q8N987 351 aa6.63□□□□□ -1.35
PTPN9-204ENST00000564970 USP38Q8NB14 1042 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms