RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 C1orf127Q8N9H9 656 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 SMG8Q8ND04 991 aaKnown RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 EIF3CQ99613 913 aaKnown RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 DEF6Q9H4E7 631 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 HAUS4Q9H6D7 363 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 SIX4Q9UIU6 781 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 IPPQ9Y573 584 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 A0A0U1RQJ8 604 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 ZNF263O14978 683 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 GPR182O15218 404 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 AKR1B10O60218 316 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 ASS1P00966 412 aaKnown RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 AKAP5P24588 427 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 GUCY2FP51841 1108 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 GCNT1Q02742 428 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 PTK2Q05397 1052 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 TRPC3Q13507 836 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 ZNF571Q7Z3V5 609 aaPredicted RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 CD302Q8IX05 232 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 FAM126BQ8IXS8 530 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 ATRIPQ8WXE1 791 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 SHC3Q92529 594 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 C16orf45Q96MC5 204 aaPredicted RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 ARID3AQ99856 593 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 SEZ6LQ9BYH1 1024 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 PLEKHA5Q9HAU0 1116 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 CHST12Q9NRB3 414 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 PADI3Q9ULW8 664 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 C2CD2Q9Y426 696 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 BZW2Q9Y6E2 419 aaKnown RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 ITGB3P05106 788 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 KRT19P08727 400 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 CLCN1P35523 988 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 USP8P40818 1118 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
SNX29-204ENST00000564791 CYP27A1Q02318 531 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 CUL2Q13617 745 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 ALKAL1Q6UXT8 129 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 ENOSF1Q7L5Y1 443 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 NT5DC4Q86YG4 428 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 FAM71AQ8IYT1 594 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 CXorf38Q8TB03 319 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 U2AF1L4Q8WU68 220 aaKnown RBP12.1□□□□□ -0.47
SNX29-204ENST00000564791 ARMC5Q96C12 935 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 FAM81BQ96LP2 452 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 ZMAT2Q96NC0 199 aaKnown RBP12.1□□□□□ -0.47
SNX29-204ENST00000564791 IMPG2Q9BZV3 1241 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 CRISPLD2Q9H0B8 497 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 KLK14Q9P0G3 267 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 PARP2Q9UGN5 583 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 DERAQ9Y315 318 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 PCDHB2Q9Y5E7 798 aa12.1□□□□□ -0.47
SNX29-204ENST00000564791 SCN1AP35498 2009 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 MGEA5O60502 916 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 IPO7O95373 1038 aaKnown RBP12.09□□□□□ -0.47
SNX29-204ENST00000564791 LCA5LO95447 670 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 SGPL1O95470 568 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 CD4P01730 458 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
SNX29-204ENST00000564791 CCDC172P0C7W6 258 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 HSPA1AP0DMV8 641 aaKnown RBP12.09□□□□□ -0.47
SNX29-204ENST00000564791 HSPA1BP0DMV9 641 aaKnown RBP12.09□□□□□ -0.47
SNX29-204ENST00000564791 KRT83P78385 493 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
SNX29-204ENST00000564791 DSC3Q14574 896 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 MBTPS1Q14703 1052 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 SGSM1Q2NKQ1 1148 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 GLRA4Q5JXX5 417 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 NYAP1Q6ZVC0 841 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 OLIG1Q8TAK6 271 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 CAGE1Q8TC20 777 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
SNX29-204ENST00000564791 XYLT2Q9H1B5 865 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 FAM105AQ9NUU6 356 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 RNF19AQ9NV58 838 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 DPP3Q9NY33 737 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 ITGA11Q9UKX5 1188 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 TANC1Q9C0D5 1861 aa12.09□□□□□ -0.47
SNX29-204ENST00000564791 A0A087X0T9 212 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 CYP26A1O43174 497 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 FAM228BP0C875 321 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 ZSCAN20P17040 1043 aaPredicted RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 TBXAS1P24557 533 aaPredicted RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 ANXA13P27216 316 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 POLR2BP30876 1174 aaKnown RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 CTCFP49711 727 aaPredicted RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 SPA17Q15506 151 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 SLC18A3Q16572 532 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 USP38Q8NB14 1042 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 SLC20A1Q8WUM9 679 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 C18orf25Q96B23 403 aaPredicted RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 SYT11Q9BT88 431 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms