RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 CFHP08603 1231 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 EZRP15311 586 aaKnown RBP16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 GTF2H1P32780 548 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 GHRHRQ02643 423 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 ADCY1Q08828 1119 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 NUGGCQ68CJ6 796 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 TBC1D1Q86TI0 1168 aaPredicted RBP16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 PRUNE1Q86TP1 453 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 GPD1LQ8N335 351 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 ATL2Q8NHH9 583 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 NINJ2Q9NZG7 142 aa16.49■□□□□ 0.23
GTF3C1-205ENST00000564747 GAS8O95995 478 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 GSTA1P08263 222 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 CETPP11597 493 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 ATF2P15336 505 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 HMGB2P26583 209 aaKnown RBP16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 SFNP31947 248 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 KRT76Q01546 638 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 E2F5Q15329 346 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 SEPT14Q6ZU15 432 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 CCDC63Q8NA47 563 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 TCP11Q8WWU5 503 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 TRAIPQ9BWF2 469 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 AVENQ9NQS1 362 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 PXMP2Q9NR77 195 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 USP15Q9Y4E8 981 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 PLSCR1O15162 318 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 UBOX5O94941 541 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 OAS1P00973 400 aaKnown RBP16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 USP37Q86T82 979 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 MAGEC3Q8TD91 643 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 GRK7Q8WTQ7 553 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 BICD1Q96G01 975 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 C1orf112Q9NSG2 853 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 GABBR1Q9UBS5 961 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 PGAP2Q9UHJ9 254 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 PCDHB2Q9Y5E7 798 aa16.48■□□□□ 0.23
GTF3C1-205ENST00000564747 BRAFP15056 766 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 SLC1A1P43005 524 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 NSFP46459 744 aaKnown RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 WNT7BP56706 349 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 SYDE1Q6ZW31 735 aaPredicted RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 TAS1R3Q7RTX0 852 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 PASD1Q8IV76 773 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 MAIP1Q8WWC4 291 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 SPIRE2Q8WWL2 714 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 MOV10L1Q9BXT6 1211 aaKnown RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 BAIAP2L1Q9UHR4 511 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 PCDHA10Q9Y5I2 948 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 KIF1CO43896 1103 aaKnown RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 ATP6V1G2O95670 118 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 CLTAP09496 248 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 TAS2R40P59535 323 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 KLF1Q13351 362 aaPredicted RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 ENOSF1Q7L5Y1 443 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 ANKS1BQ7Z6G8 1248 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 PNMA8AQ86V59 439 aaPredicted RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 FAM81BQ96LP2 452 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 C9orf72Q96LT7 481 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 SUFUQ9UMX1 484 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 NEU2Q9Y3R4 380 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 CEP83Q9Y592 693 aa16.47■□□□□ 0.23
GTF3C1-205ENST00000564747 SLC8A1P32418 973 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 MAN1A1P33908 653 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 GJC1P36383 396 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 SP4Q02446 784 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 C11orf70Q9BRQ4 267 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 NAALADL1Q9UQQ1 740 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 UMODL1Q5DID0 1318 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 PROSCO94903 275 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 CYP1A1P04798 512 aaPredicted RBP16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 ATP5DP30049 168 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 DSG3P32926 999 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 ZKSCAN8Q15776 578 aaPredicted RBP16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 FKBP1CQ5VVH2 108 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 C15orf39Q6ZRI6 1047 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 MON1BQ7L1V2 547 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 SAMD3Q8N6K7 520 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 CKAP2Q8WWK9 683 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 NOD2Q9HC29 1040 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
GTF3C1-205ENST00000564747 SORBS3O60504 671 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 STBD1O95210 358 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 GJB6O95452 261 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 FDX1P10109 184 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 TNNI1P19237 187 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 CD58P19256 250 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 CENPCQ03188 943 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 BRDTQ58F21 947 aaPredicted RBP16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 ZNF365Q70YC5 407 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 NLRX1Q86UT6 975 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 FAM83AQ86UY5 434 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 SRRM1Q8IYB3 904 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms