RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 NUDT7P0C024 238 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ZBTB48P10074 688 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 COPB2P35606 906 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 MATR3P43243 847 aaKnown RBP eCLIP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 NAMPTP43490 491 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 IREB2P48200 963 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ALDH5A1P51649 535 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 CYP24A1Q07973 514 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 NFX1Q12986 1120 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 TTC39BQ5VTQ0 682 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SLFN12LQ6IEE8 588 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 CCSAPQ6IQ19 270 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 C16orf46Q6P387 395 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 KCNV1Q6PIU1 500 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 TRMT1LQ7Z2T5 733 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 CBWD2Q8IUF1 395 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SCG3Q8WXD2 468 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 BSNDQ8WZ55 320 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SHC3Q92529 594 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 CAVIN3Q969G5 261 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 APBA2Q99767 749 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 DHX33Q9H6R0 707 aaKnown RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ST7Q9NRC1 585 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 NRBP2Q9NSY0 501 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 RAB20Q9NX57 234 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SEPT9Q9UHD8 586 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 FBXO9Q9UK97 447 aaPredicted RBP7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 HPCAL4Q9UM19 191 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SLC27A5Q9Y2P5 690 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 SYNGAP1Q96PV0 1343 aa7.8□□□□□ -1.16
HERPUD1-209ENST00000564678 ARID2Q68CP9 1835 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 PTPRFP10586 1907 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 A0A0G2JLL6 359 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 TMCO5BA8MYB1 307 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 H3BQF6 201 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 PGRMC1O00264 195 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 HNRNPDLO14979 420 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 POLR3GO15318 223 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 EXTL3O43909 919 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 TNNT3P45378 269 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 POLGP54098 1239 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 GPC5P78333 572 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 SP2Q02086 613 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 GCNT1Q02742 428 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 STRN3Q13033 797 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 PRPF4BQ13523 1007 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 SLC39A4Q6P5W5 647 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 CYFIP1Q7L576 1253 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 PRRT2Q7Z6L0 340 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 ERO1BQ86YB8 467 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 ARHGEF19Q8IW93 802 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 METTL13Q8N6R0 699 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 NT5C1BQ96P26 610 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 NAP1L3Q99457 506 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 SPATC1LQ9H0A9 340 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 PORCNQ9H237 461 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 CARD9Q9H257 536 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 ADAM21Q9UKJ8 722 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 POLIQ9UNA4 740 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 PACSIN2Q9UNF0 486 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 SBF1O95248 1867 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 WDR90Q96KV7 1748 aa7.79□□□□□ -1.16
HERPUD1-209ENST00000564678 GOLGA8IPA6NC78 632 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 GOLGA8JA6NMD2 632 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 TSPAN6O43657 245 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CEP104O60308 925 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 LRRN2O75325 713 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 MTA2O94776 668 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 MYBL2P10244 700 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ATP4AP20648 1035 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CTHP32929 405 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CYP2C19P33261 490 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ARL2P36404 184 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 MAP2K1Q02750 393 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 EMC2Q15006 297 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 NFE2Q16621 373 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 MTERF2Q49AM1 385 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 FAM160B1Q5W0V3 765 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ALS2CLQ60I27 953 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CHRDL2Q6WN34 429 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SV2AQ7L0J3 742 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ZNF771Q7L3S4 317 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 MAATS1Q7Z4T9 603 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 PPM1KQ8N3J5 372 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ZSWIM2Q8NEG5 633 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 AFAP1L1Q8TED9 768 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 HDAC7Q8WUI4 952 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SLC7A3Q8WY07 619 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SEPT1Q8WYJ6 367 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 POLR3FQ9H1D9 316 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ZCCHC17Q9NP64 241 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 EHD2Q9NZN4 543 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 BTBD7Q9P203 1132 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 LCTP09848 1927 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 GAS2O43903 313 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 BUB1BO60566 1050 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 HEXIM1O94992 359 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 FTLP02792 175 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 NF2P35240 595 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms