RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 MACROD2A1Z1Q3 448 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 PGK1P00558 417 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 PNMA6AP0CW24 399 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-210ENST00000564587 ATICP31939 592 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 RGS19P49795 217 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 YARSP54577 528 aaKnown RBP16.71■□□□□ 0.27
COMMD4-210ENST00000564587 IRX5P78411 483 aaPredicted RBP16.71■□□□□ 0.27
COMMD4-210ENST00000564587 SNX17Q15036 470 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 CXCL17Q6UXB2 119 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 KAT5Q92993 513 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 OSMRQ99650 979 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 PI4K2AQ9BTU6 479 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 CELF4Q9BZC1 486 aaKnown RBP16.71■□□□□ 0.27
COMMD4-210ENST00000564587 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 TRIM10Q9UDY6 481 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 CDC23Q9UJX2 597 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 CNTN6Q9UQ52 1028 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 PCDHB2Q9Y5E7 798 aa16.71■□□□□ 0.27
COMMD4-210ENST00000564587 TRIP12Q14669 1992 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 ANK1P16157 1881 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 DYNC1I1O14576 645 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 CYP26A1O43174 497 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 CSDE1O75534 798 aaKnown RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 ABL1P00519 1130 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 TMEM253P0C7T8 217 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 CXCL8P10145 99 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 KRT5P13647 590 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 ELNP15502 786 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 CYP11B1P15538 503 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 CCND3P30281 292 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 HOXA11P31270 313 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 NAP1L1P55209 391 aaKnown RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 OSTNP61366 133 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 MRPS6P82932 125 aaKnown RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 CDR2Q01850 454 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 TRIM32Q13049 653 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 HIC1Q14526 733 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 GLYCTKQ8IVS8 523 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 CEP120Q8N960 986 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 LNX1Q8TBB1 728 aaPredicted RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 EPS8L1Q8TE68 723 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 TSEN34Q9BSV6 310 aaKnown RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 NIF3L1Q9GZT8 377 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 NOCTQ9UK39 431 aaKnown RBP16.7■□□□□ 0.26
COMMD4-210ENST00000564587 GINS2Q9Y248 185 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 TRPV2Q9Y5S1 764 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 MRFAP1Q9Y605 127 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 THSD7BQ9C0I4 1608 aa16.7■□□□□ 0.26
COMMD4-210ENST00000564587 ANKRD62A6NC57 917 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 CTIFO43310 598 aaKnown RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 RTN2O75298 545 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 ASGR1P07306 291 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 P4HA1P13674 534 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 PRLRP16471 622 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 TMEM62Q0P6H9 643 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 TMEM132DQ14C87 1099 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 KCNA10Q16322 511 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 ZNF699Q32M78 642 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 SLC10A6Q3KNW5 377 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 PAPD7Q5XG87 772 aaKnown RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 CCSAPQ6IQ19 270 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 TRIM72Q6ZMU5 477 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 CDR2LQ86X02 465 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 EFCAB13Q8IY85 973 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 RPUSD2Q8IZ73 545 aaKnown RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 TTC39CQ8N584 583 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 CEP112Q8N8E3 955 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 MNS1Q8NEH6 495 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 CTNNBL1Q8WYA6 563 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 SEZ6LQ9BYH1 1024 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 TRIM6Q9C030 488 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 ISCUQ9H1K1 167 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 VRTNQ9H8Y1 702 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 SEPT11Q9NVA2 429 aaKnown RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-210ENST00000564587 DUSP10Q9Y6W6 482 aa16.69■□□□□ 0.26
COMMD4-210ENST00000564587 MOXD2PA6NHM9 499 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 FANCGO15287 622 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 XPOTO43592 962 aaKnown RBP16.68■□□□□ 0.26
COMMD4-210ENST00000564587 CLSTN1O94985 981 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 SGPL1O95470 568 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 NPTXRO95502 500 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
COMMD4-210ENST00000564587 ZNF200P98182 395 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-210ENST00000564587 TCEAL1Q15170 157 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 FAM47CQ5HY64 1035 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 SERINC5Q86VE9 423 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 SYCE1Q8N0S2 351 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 CDHR5Q9HBB8 845 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 APOBEC3GQ9HC16 384 aaKnown RBP16.68■□□□□ 0.26
COMMD4-210ENST00000564587 CHST12Q9NRB3 414 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 TFR2Q9UP52 801 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 PCDHB4Q9Y5E5 795 aa16.68■□□□□ 0.26
COMMD4-210ENST00000564587 PCDHGC5Q9Y5F6 944 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms