RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 OXCT2Q9BYC2 517 aaPredicted RBP16.38■□□□□ 0.21
SPG7-210ENST00000564409 PARVGQ9HBI0 331 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 AVENQ9NQS1 362 aaPredicted RBP16.38■□□□□ 0.21
SPG7-210ENST00000564409 SLC2A4RGQ9NR83 387 aa16.38■□□□□ 0.21
SPG7-210ENST00000564409 NOTCH4Q99466 2003 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 XPOTO43592 962 aaKnown RBP16.37■□□□□ 0.21
SPG7-210ENST00000564409 ABLIM3O94929 683 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 PIGRP01833 764 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 PAX3P23760 479 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 BRCC3P46736 316 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 ZNF131P52739 623 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 MRPL58Q14197 206 aaKnown RBP16.37■□□□□ 0.21
SPG7-210ENST00000564409 VARS2Q5ST30 1063 aaKnown RBP16.37■□□□□ 0.21
SPG7-210ENST00000564409 TPGS2Q68CL5 300 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 GPBP1Q86WP2 473 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 SIX5Q8N196 739 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 FLCNQ8NFG4 579 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 RASSF8Q8NHQ8 419 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 BICD1Q96G01 975 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 ZBTB45Q96K62 511 aaPredicted RBP16.37■□□□□ 0.21
SPG7-210ENST00000564409 REEP2Q9BRK0 252 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 CCSER1Q9C0I3 900 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 MYH15Q9Y2K3 1946 aa16.37■□□□□ 0.21
SPG7-210ENST00000564409 TTC26A0AVF1 554 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 ARHGEF37A1IGU5 675 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 PROB1E7EW31 1015 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 CCL16O15467 120 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 TBC1D4O60343 1298 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 FAM13AO94988 1023 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 HARSP12081 509 aaKnown RBP16.36■□□□□ 0.21
SPG7-210ENST00000564409 ATF2P15336 505 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 NPR3P17342 541 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 CYP3A5P20815 502 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 ELF1P32519 619 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 MATR3P43243 847 aaKnown RBP eCLIP16.36■□□□□ 0.21
SPG7-210ENST00000564409 LIG4P49917 911 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 SF3A1Q15459 793 aaKnown RBP16.36■□□□□ 0.21
SPG7-210ENST00000564409 CWF19L1Q69YN2 538 aaKnown RBP16.36■□□□□ 0.21
SPG7-210ENST00000564409 TCEAL8Q8IYN2 117 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 MYCT1Q8N699 235 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 RSAD2Q8WXG1 361 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 RAD54LQ92698 747 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 BLOC1S4Q9NUP1 217 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 TBX20Q9UMR3 447 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
SPG7-210ENST00000564409 I3L4J1 428 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 HNRNPDLO14979 420 aaKnown RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 OGTO15294 1046 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 NARSO43776 548 aaKnown RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 TRAK2O60296 914 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 TBCAO75347 108 aaKnown RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 KRT18P05783 430 aaKnown RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 PLCG1P19174 1290 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 IGFBP6P24592 240 aaPredicted RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 LRPAP1P30533 357 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 MCM4P33991 863 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 DDIT3P35638 169 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 ROR1Q01973 937 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 PPP2R3AQ06190 1150 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 PABPC1LQ4VXU2 614 aaKnown RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 ZNF280DQ6N043 979 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 PHLDB3Q6NSJ2 640 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 RSPO2Q6UXX9 243 aaPredicted RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 CD302Q8IX05 232 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 LARP4BQ92615 738 aaKnown RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 FGF13Q92913 245 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 C18orf25Q96B23 403 aaPredicted RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 SHDQ96IW2 340 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 GDE1Q9NZC3 331 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 UBQLN1Q9UMX0 589 aaKnown RBP16.35■□□□□ 0.21
SPG7-210ENST00000564409 NUMBLQ9Y6R0 609 aa16.35■□□□□ 0.21
SPG7-210ENST00000564409 NPHP3-ACAD11A0A0J9YXS1 232 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 VPS37CA5D8V6 355 aaPredicted RBP16.34■□□□□ 0.21
SPG7-210ENST00000564409 H0Y858 1186 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 K7ENM7 598 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 PRRG1O14668 218 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 MEFVO15553 781 aaPredicted RBP16.34■□□□□ 0.21
SPG7-210ENST00000564409 MICAL2O94851 1124 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 LRG1P02750 347 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 ADRB2P07550 413 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 CFHP08603 1231 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 CXCL8P10145 99 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 PTPN2P17706 415 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 RFX1P22670 979 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 MARCKSP29966 332 aaPredicted RBP16.34■□□□□ 0.21
SPG7-210ENST00000564409 POU5F1Q01860 360 aaKnown RBP16.34■□□□□ 0.21
SPG7-210ENST00000564409 ZBTB6Q15916 424 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 CCDC105Q8IYK2 499 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
SPG7-210ENST00000564409 ST6GALNAC4Q9H4F1 302 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 DNMT3BQ9UBC3 853 aaKnown RBP16.34■□□□□ 0.21
SPG7-210ENST00000564409 STK17AQ9UEE5 414 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 CCDC39Q9UFE4 941 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 PCDHB8Q9UN66 801 aa16.34■□□□□ 0.21
SPG7-210ENST00000564409 MORC2Q9Y6X9 1032 aaPredicted RBP16.34■□□□□ 0.21
SPG7-210ENST00000564409 A0A0B4J269 797 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 WDR27A2RRH5 827 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 M0QZQ0 153 aa16.33■□□□□ 0.2
SPG7-210ENST00000564409 STK25O00506 426 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms