RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ABHD14A-ACY1A0A1B0GW23 586 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 EVI5O60447 810 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 BAIAP3O94812 1187 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 GYPCP04921 128 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 P4HA1P13674 534 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 UCHL3P15374 230 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 TBXAS1P24557 533 aaPredicted RBP13.81□□□□□ -0.2
CLK3-214ENST00000564096 ATICP31939 592 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 DEKP35659 375 aaKnown RBP13.81□□□□□ -0.2
CLK3-214ENST00000564096 PNPLA4P41247 253 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 KLK7P49862 253 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 NOP14P78316 857 aaKnown RBP13.81□□□□□ -0.2
CLK3-214ENST00000564096 RBP5P82980 135 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 ZBED6P86452 979 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 KCNMA1Q12791 1236 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 MYO1EQ12965 1108 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 ZNF699Q32M78 642 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 KLHDC7AQ5VTJ3 777 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 ALKAL1Q6UXT8 129 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 ENOSF1Q7L5Y1 443 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 ZNF598Q86UK7 904 aaKnown RBP13.81□□□□□ -0.2
CLK3-214ENST00000564096 NPAS4Q8IUM7 802 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 LPPQ93052 612 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 GAD1Q99259 594 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 MRPL9Q9BYD2 267 aaKnown RBP13.81□□□□□ -0.2
CLK3-214ENST00000564096 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 ZNHIT6Q9NWK9 470 aaKnown RBP13.81□□□□□ -0.2
CLK3-214ENST00000564096 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 KLK14Q9P0G3 267 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 MYO6Q9UM54 1294 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 PCDHB7Q9Y5E2 793 aa13.81□□□□□ -0.2
CLK3-214ENST00000564096 ARL5CA6NH57 179 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 INPPL1O15357 1258 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
CLK3-214ENST00000564096 AMHP03971 560 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 ITGB3P05106 788 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 THP07101 528 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 CSF2RAP15509 400 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 SLC9A1P19634 815 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 POLR2BP30876 1174 aaKnown RBP13.8□□□□□ -0.2
CLK3-214ENST00000564096 CASP14P31944 242 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 MFAP3P55082 362 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 POLR2FP61218 127 aaKnown RBP13.8□□□□□ -0.2
CLK3-214ENST00000564096 FAM189BP81408 668 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 GCNT1Q02742 428 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 FPGSQ05932 587 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 TBX2Q13207 712 aaPredicted RBP13.8□□□□□ -0.2
CLK3-214ENST00000564096 RAPGEF1Q13905 1077 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 GPNMBQ14956 572 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 SGSM1Q2NKQ1 1148 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 PSRC1Q6PGN9 363 aaPredicted RBP13.8□□□□□ -0.2
CLK3-214ENST00000564096 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 PPM1KQ8N3J5 372 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 LRRC52Q8N7C0 313 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 C1orf127Q8N9H9 656 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 CCDC112Q8NEF3 446 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 ZNF516Q92618 1163 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 TTYH3Q9C0H2 523 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 GANQ9H2C0 597 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 KANSL3Q9P2N6 904 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 TUBGCP4Q9UGJ1 667 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 CAPN11Q9UMQ6 739 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 INPP5FQ9Y2H2 1132 aa13.8□□□□□ -0.2
CLK3-214ENST00000564096 CCDC85CA6NKD9 419 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 ENPP3O14638 875 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 PTGESO14684 152 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 STAU1O95793 577 aaKnown RBP13.79□□□□□ -0.2
CLK3-214ENST00000564096 ASS1P00966 412 aaKnown RBP13.79□□□□□ -0.2
CLK3-214ENST00000564096 CCDC172P0C7W6 258 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 KRT9P35527 623 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 KCNJ6P48051 423 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 SCNN1GP51170 649 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 YWHAEP62258 255 aaKnown RBP13.79□□□□□ -0.2
CLK3-214ENST00000564096 MLLT1Q03111 559 aaPredicted RBP13.79□□□□□ -0.2
CLK3-214ENST00000564096 SMYD5Q6GMV2 418 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 CCDC186Q7Z3E2 898 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 CPLX3Q8WVH0 158 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 ZFP42Q96MM3 310 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 UROC1Q96N76 676 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 ZMAT2Q96NC0 199 aaKnown RBP13.79□□□□□ -0.2
CLK3-214ENST00000564096 PPP1R10Q96QC0 940 aaKnown RBP13.79□□□□□ -0.2
CLK3-214ENST00000564096 NIF3L1Q9GZT8 377 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 SIX2Q9NPC8 291 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 IL23AQ9NPF7 189 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 ABHD10Q9NUJ1 306 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 FHOD1Q9Y613 1164 aa13.79□□□□□ -0.2
CLK3-214ENST00000564096 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 EPHB6O15197 1021 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 VNN1O95497 513 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 LRPAP1P30533 357 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 RGS19P49795 217 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 MYL6P60660 151 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 TNNC1P63316 161 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 LRMPQ12912 555 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 NOMO2Q5JPE7 1267 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 IQCEQ6IPM2 695 aa13.78□□□□□ -0.2
CLK3-214ENST00000564096 RRAGAQ7L523 313 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms