RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ATP6V1B1P15313 513 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 ATXN3P54252 364 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 GRAPQ13588 217 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 ARID3BQ8IVW6 561 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 GRAPLQ8TC17 118 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 CHMP2BQ9UQN3 213 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 A0A0A6YYK5 440 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 FECHP22830 423 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 FUT2Q10981 343 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 GIT2Q14161 759 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 SYDE1Q6ZW31 735 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 EIF1ADQ8N9N8 165 aaKnown RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 ACSF2Q96CM8 615 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 PURBQ96QR8 312 aaKnown RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 RPS6KC1Q96S38 1066 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 PI4K2AQ9BTU6 479 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 RNPEPL1Q9HAU8 725 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 HSPBP1Q9NZL4 362 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 EPS15L1Q9UBC2 864 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 GNA15P30679 374 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 SLC12A2P55011 1212 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 PPP6R3Q5H9R7 873 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 NGRNQ9NPE2 291 aaKnown RBP13.32□□□□□ -0.28
COMMD4-209ENST00000564068 TACC3Q9Y6A5 838 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 ESYT2A0FGR8 921 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 CLRN2A0PK11 232 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
COMMD4-209ENST00000564068 ATP4AP20648 1035 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 NCALDP61601 193 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 RPS6KA2Q15349 733 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 VGLL2Q8N8G2 317 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 SLC35C1Q96A29 364 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 CENPTQ96BT3 561 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 FAM111AQ96PZ2 611 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 TTYH3Q9C0H2 523 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 SLC9A2Q9UBY0 812 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 FLT1P17948 1338 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 CES2O00748 559 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 ZBTB33Q86T24 672 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 CCNYQ8ND76 341 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 MIS12Q9H081 205 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 TAS2R14Q9NYV8 317 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 HSPA4LO95757 839 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 KRT10P13645 584 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 PTPN4P29074 926 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 GSCP56915 257 aaPredicted RBP13.31□□□□□ -0.28
COMMD4-209ENST00000564068 PHEXP78562 749 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 KCNA1Q09470 495 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 COG2Q14746 738 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 HGSNATQ68CP4 663 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 APOL6Q9BWW8 343 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 VPS11Q9H270 941 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 GMNNO75496 209 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 ALCAMQ13740 583 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 ANKRD20A4Q4UJ75 823 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 TXNRD3Q86VQ6 643 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 TMEM35BQ8NCS4 154 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 TNFRSF25Q93038 417 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 ELMO3Q96BJ8 720 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 SERPINI1Q99574 410 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 ZNF408Q9H9D4 720 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 IFT172Q9UG01 1749 aa13.31□□□□□ -0.28
COMMD4-209ENST00000564068 CRCPO75575 148 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 BBOX1O75936 387 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 TNNC2P02585 160 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 ECE1P42892 770 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 MARCKSL1P49006 195 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 YARSP54577 528 aaKnown RBP13.3□□□□□ -0.28
COMMD4-209ENST00000564068 B4GALNT2Q8NHY0 566 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 PDP2Q9P2J9 529 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 GTF3C4Q9UKN8 822 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-209ENST00000564068 LGR5O75473 907 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 CASP5P51878 434 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 YWHAEP62258 255 aaKnown RBP13.3□□□□□ -0.28
COMMD4-209ENST00000564068 CNGA3Q16281 694 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 RBBP8NLQ8NC74 664 aaPredicted RBP13.3□□□□□ -0.28
COMMD4-209ENST00000564068 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 PPP1R36Q96LQ0 422 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 SLCO1B3Q9NPD5 702 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 MTO1Q9Y2Z2 717 aaKnown RBP13.3□□□□□ -0.28
COMMD4-209ENST00000564068 FOXO6A8MYZ6 492 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 IZUMO2Q6UXV1 221 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 PRPF39Q86UA1 669 aaKnown RBP13.3□□□□□ -0.28
COMMD4-209ENST00000564068 AFAP1L2Q8N4X5 818 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 SLC25A41Q8N5S1 370 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 DNAAF3Q8N9W5 541 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 SCG3Q8WXD2 468 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms