RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 FAM212AQ96EL1 285 aa33.48■■■□□ 2.95
CMTM4-204ENST00000563952 STRA6Q9BX79 667 aa33.48■■■□□ 2.95
CMTM4-204ENST00000563952 EXOC7Q9UPT5 735 aa33.48■■■□□ 2.95
CMTM4-204ENST00000563952 PI4K2BG5E9Z4 385 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 TGM5O43548 720 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 FGFR3P22607 806 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 RPL9P32969 192 aaKnown RBP33.47■■■□□ 2.95
CMTM4-204ENST00000563952 CASP5P51878 434 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 AMPD3Q01432 767 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 KCNA1Q09470 495 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 L1TD1Q5T7N2 865 aaKnown RBP33.47■■■□□ 2.95
CMTM4-204ENST00000563952 RNF135Q8IUD6 432 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 ACCSQ96QU6 501 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 FGFBP2Q9BYJ0 223 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 TSHZ2Q9NRE2 1034 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 DPP7Q9UHL4 492 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 NUB1Q9Y5A7 615 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 PCDHB13Q9Y5F0 798 aa33.47■■■□□ 2.95
CMTM4-204ENST00000563952 TKTP29401 623 aaKnown RBP33.46■■■□□ 2.95
CMTM4-204ENST00000563952 PDXDC1Q6P996 788 aa33.46■■■□□ 2.95
CMTM4-204ENST00000563952 TMEM130Q8N3G9 435 aa33.46■■■□□ 2.95
CMTM4-204ENST00000563952 CLSTN3Q9BQT9 956 aa33.46■■■□□ 2.95
CMTM4-204ENST00000563952 C1QTNF1Q9BXJ1 281 aa33.46■■■□□ 2.95
CMTM4-204ENST00000563952 TRIM9Q9C026 710 aa33.46■■■□□ 2.95
CMTM4-204ENST00000563952 CPSF3Q9UKF6 684 aaKnown RBP33.46■■■□□ 2.95
CMTM4-204ENST00000563952 AGO2Q9UKV8 859 aaKnown RBP33.46■■■□□ 2.95
CMTM4-204ENST00000563952 ACOT2P49753 483 aa33.45■■■□□ 2.95
CMTM4-204ENST00000563952 ASIC1P78348 528 aa33.45■■■□□ 2.95
CMTM4-204ENST00000563952 KRT85P78386 507 aa33.45■■■□□ 2.95
CMTM4-204ENST00000563952 POMGNT1Q8WZA1 660 aa33.45■■■□□ 2.95
CMTM4-204ENST00000563952 SPATA32Q96LK8 384 aa33.45■■■□□ 2.95
CMTM4-204ENST00000563952 STYXL1Q9Y6J8 313 aa33.45■■■□□ 2.95
CMTM4-204ENST00000563952 ALCAMQ13740 583 aa33.44■■■□□ 2.94
CMTM4-204ENST00000563952 GPR149Q86SP6 731 aa33.44■■■□□ 2.94
CMTM4-204ENST00000563952 SYCP3Q8IZU3 236 aa33.44■■■□□ 2.94
CMTM4-204ENST00000563952 LEO1Q8WVC0 666 aaPredicted RBP33.44■■■□□ 2.94
CMTM4-204ENST00000563952 MUTYHQ9UIF7 546 aa33.44■■■□□ 2.94
CMTM4-204ENST00000563952 UBQLN1Q9UMX0 589 aaKnown RBP33.44■■■□□ 2.94
CMTM4-204ENST00000563952 DCXO43602 365 aa33.43■■■□□ 2.94
CMTM4-204ENST00000563952 ALADP13716 330 aa33.43■■■□□ 2.94
CMTM4-204ENST00000563952 HPS3Q969F9 1004 aa33.43■■■□□ 2.94
CMTM4-204ENST00000563952 MAGEF1Q9HAY2 307 aa33.43■■■□□ 2.94
CMTM4-204ENST00000563952 NR2E1Q9Y466 385 aa33.43■■■□□ 2.94
CMTM4-204ENST00000563952 MTCL1Q9Y4B5 1905 aaKnown RBP33.42■■■□□ 2.94
CMTM4-204ENST00000563952 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP33.42■■■□□ 2.94
CMTM4-204ENST00000563952 CCDC195A0A1B0GUA6 201 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 ADAM12O43184 909 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 RFPL2O75678 378 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 MCM4P33991 863 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 LILRA6Q6PI73 481 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 KREMEN2Q8NCW0 462 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 PLEKHA4Q9H4M7 779 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 KCNH3Q9ULD8 1083 aa33.42■■■□□ 2.94
CMTM4-204ENST00000563952 C2orf16Q68DN1 1984 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 XPOTO43592 962 aaKnown RBP33.41■■■□□ 2.94
CMTM4-204ENST00000563952 PRPF6O94906 941 aaKnown RBP33.41■■■□□ 2.94
CMTM4-204ENST00000563952 C1RP00736 705 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 ADSSP30520 456 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 GUCY2FP51841 1108 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 POSTNQ15063 836 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 ZBTB6Q15916 424 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 JADE1Q6IE81 842 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 ANKS3Q6ZW76 656 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 CD302Q8IX05 232 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 CMASQ8NFW8 434 aaPredicted RBP33.41■■■□□ 2.94
CMTM4-204ENST00000563952 HDAC7Q8WUI4 952 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 C7orf25Q9BPX7 421 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 MTRRQ9UBK8 725 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 ATP6V1DQ9Y5K8 247 aa33.41■■■□□ 2.94
CMTM4-204ENST00000563952 ADRB2P07550 413 aa33.4■■■□□ 2.94
CMTM4-204ENST00000563952 CYP3A5P20815 502 aa33.4■■■□□ 2.94
CMTM4-204ENST00000563952 OR1D2P34982 312 aa33.4■■■□□ 2.94
CMTM4-204ENST00000563952 C15orf39Q6ZRI6 1047 aa33.4■■■□□ 2.94
CMTM4-204ENST00000563952 BLZF1Q9H2G9 400 aa33.4■■■□□ 2.94
CMTM4-204ENST00000563952 GTF3C5Q9Y5Q8 519 aaPredicted RBP33.4■■■□□ 2.94
CMTM4-204ENST00000563952 CDY1Q9Y6F8 540 aa33.4■■■□□ 2.94
CMTM4-204ENST00000563952 FAM86C2PA6NEL3 165 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 TULP1O00294 542 aaPredicted RBP33.39■■■□□ 2.94
CMTM4-204ENST00000563952 NFICP08651 508 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 CASP1P29466 404 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 LRPAP1P30533 357 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 AFMP43652 599 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 STXBP4Q6ZWJ1 553 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 CEP57L1Q8IYX8 460 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 GLIS3Q8NEA6 775 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 TSPAN18Q96SJ8 248 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 PYM1Q9BRP8 204 aaKnown RBP33.39■■■□□ 2.94
CMTM4-204ENST00000563952 ANK1P16157 1881 aa33.39■■■□□ 2.94
CMTM4-204ENST00000563952 TMEM132DQ14C87 1099 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 VARS2Q5ST30 1063 aaKnown RBP33.38■■■□□ 2.93
CMTM4-204ENST00000563952 CNNM4Q6P4Q7 775 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 RSPO2Q6UXX9 243 aaPredicted RBP33.38■■■□□ 2.93
CMTM4-204ENST00000563952 BEST2Q8NFU1 509 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 SAAL1Q96ER3 474 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 SUSD3Q96L08 255 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 TMEM206Q9H813 350 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 SERTAD1Q9UHV2 236 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 FBXW11Q9UKB1 542 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 BACE2Q9Y5Z0 518 aa33.38■■■□□ 2.93
CMTM4-204ENST00000563952 C2CD4DB7Z1M9 353 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms