RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 VPS13AQ96RL7 3174 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 SYN3O14994 580 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 HIP1RO75146 1068 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 MCF2P10911 925 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 HARSP12081 509 aaKnown RBP22.88■■□□□ 1.25
HERC2-204ENST00000563945 CD72P21854 359 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 IGFBP6P24592 240 aaPredicted RBP22.88■■□□□ 1.25
HERC2-204ENST00000563945 RPL9P32969 192 aaKnown RBP22.88■■□□□ 1.25
HERC2-204ENST00000563945 ROR1Q01973 937 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 ST3GAL1Q11201 340 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 CYP4A22Q5TCH4 519 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 IQCEQ6IPM2 695 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 SLC8B1Q6J4K2 584 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 CD300LGQ6UXG3 332 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 C3orf58Q8NDZ4 430 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 TARS2Q9BW92 718 aaKnown RBP22.88■■□□□ 1.25
HERC2-204ENST00000563945 PPP4R2Q9NY27 417 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 KCNG1Q9UIX4 513 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 MTF2Q9Y483 593 aaPredicted RBP22.88■■□□□ 1.25
HERC2-204ENST00000563945 ZNF292O60281 2723 aa22.88■■□□□ 1.25
HERC2-204ENST00000563945 ARHGEF37A1IGU5 675 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 E9PMD0 336 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 MARCKSP29966 332 aaPredicted RBP22.87■■□□□ 1.25
HERC2-204ENST00000563945 SOX4Q06945 474 aaPredicted RBP22.87■■□□□ 1.25
HERC2-204ENST00000563945 STRN3Q13033 797 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 PTGDRQ13258 359 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 ALKAL1Q6UXT8 129 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 DGLUCYQ7Z3D6 616 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 C17orf75Q9HAS0 396 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 AVENQ9NQS1 362 aaPredicted RBP22.87■■□□□ 1.25
HERC2-204ENST00000563945 NCDNQ9UBB6 729 aa22.87■■□□□ 1.25
HERC2-204ENST00000563945 MIA3Q5JRA6 1907 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 WDR87Q6ZQQ6 2873 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 ABLIM3O94929 683 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 ATF2P15336 505 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 NBR1Q14596 966 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 CTXN3Q4LDR2 81 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 XKR4Q5GH76 650 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 TPGS2Q68CL5 300 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 MPZL3Q6UWV2 235 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 PDZD4Q76G19 769 aaPredicted RBP22.86■■□□□ 1.25
HERC2-204ENST00000563945 C4orf32Q8N8J7 132 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 APPL2Q8NEU8 664 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 SECISBP2LQ93073 1101 aaKnown RBP22.86■■□□□ 1.25
HERC2-204ENST00000563945 ELSPBP1Q96BH3 223 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 RMDN1Q96DB5 314 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 ZNF512Q96ME7 567 aaPredicted RBP22.86■■□□□ 1.25
HERC2-204ENST00000563945 BRD9Q9H8M2 597 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 ZFP14Q9HCL3 533 aa22.86■■□□□ 1.25
HERC2-204ENST00000563945 TRIP11Q15643 1979 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 WDR27A2RRH5 827 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 SPTLC1O15269 473 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 KCNE1P15382 129 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 CEBPBP17676 345 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 MCM4P33991 863 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 SMTNP53814 917 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 PUM1Q14671 1186 aaKnown RBP eCLIP22.85■■□□□ 1.25
HERC2-204ENST00000563945 ZRSR1Q15695 479 aaKnown RBP22.85■■□□□ 1.25
HERC2-204ENST00000563945 SLC5A9Q2M3M2 681 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 TANGO2Q6ICL3 276 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 DTHD1Q6ZMT9 781 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 TCEAL8Q8IYN2 117 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 MAML2Q8IZL2 1156 aaPredicted RBP22.85■■□□□ 1.25
HERC2-204ENST00000563945 DCLK2Q8N568 766 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 IGSF22Q8N9C0 903 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 TIPINQ9BVW5 301 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 PTPRHQ9HD43 1115 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 HEBP1Q9NRV9 189 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 FBXL5Q9UKA1 691 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 PCDHGA2Q9Y5H1 932 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 DMDP11532 3685 aa22.85■■□□□ 1.25
HERC2-204ENST00000563945 LAD1O00515 517 aa22.84■■□□□ 1.25
HERC2-204ENST00000563945 MAN2B1O00754 1011 aa22.84■■□□□ 1.25
HERC2-204ENST00000563945 MATR3P43243 847 aaKnown RBP eCLIP22.84■■□□□ 1.25
HERC2-204ENST00000563945 ZNF280DQ6N043 979 aa22.84■■□□□ 1.25
HERC2-204ENST00000563945 RINT1Q6NUQ1 792 aa22.84■■□□□ 1.25
HERC2-204ENST00000563945 ZMAT2Q96NC0 199 aaKnown RBP22.84■■□□□ 1.25
HERC2-204ENST00000563945 TRMT61BQ9BVS5 477 aaKnown RBP22.84■■□□□ 1.25
HERC2-204ENST00000563945 PLA2G2FQ9BZM2 168 aa22.84■■□□□ 1.25
HERC2-204ENST00000563945 SH2B1Q9NRF2 756 aaPredicted RBP22.84■■□□□ 1.25
HERC2-204ENST00000563945 ARHGAP28Q9P2N2 729 aa22.84■■□□□ 1.25
HERC2-204ENST00000563945 INSL5Q9Y5Q6 135 aa22.84■■□□□ 1.25
HERC2-204ENST00000563945 SLC16A4O15374 487 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 TARSP26639 723 aaKnown RBP22.83■■□□□ 1.25
HERC2-204ENST00000563945 ADCY1Q08828 1119 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 DNASE1L2Q92874 299 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 C18orf25Q96B23 403 aaPredicted RBP22.83■■□□□ 1.25
HERC2-204ENST00000563945 CLDN23Q96B33 292 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 ZSCAN32Q9NX65 697 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 CNTN3Q9P232 1028 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 ANKFY1Q9P2R3 1169 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 MAFFQ9ULX9 164 aa22.83■■□□□ 1.25
HERC2-204ENST00000563945 SFI1A8K8P3 1242 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 MICAL2O94851 1124 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 CPB1P15086 417 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 RPS9P46781 194 aaKnown RBP22.82■■□□□ 1.24
HERC2-204ENST00000563945 DAW1Q8N136 415 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 GPR161Q8N6U8 529 aaKnown RBP22.82■■□□□ 1.24
HERC2-204ENST00000563945 SUMF1Q8NBK3 374 aa22.82■■□□□ 1.24
HERC2-204ENST00000563945 IRF7Q92985 503 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms