RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 BDP1A6H8Y1 2624 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 A0A1B0GVL5 298 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 A0A1W2PQ27 194 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 A0A1W2PQ64 194 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 LACTBL1A8MY62 500 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 EIF3DO15371 548 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLK3-213ENST00000563842 TEX28O15482 410 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 FAM189A1O60320 539 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 GLUD1P00367 558 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 MYL1P05976 194 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 MYBP10242 640 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 PFKFB1P16118 471 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 EPCAMP16422 314 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 PAX3P23760 479 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 SSTR3P32745 418 aaPredicted RBP14.56□□□□□ -0.08
CLK3-213ENST00000563842 SYKP43405 635 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 AFMP43652 599 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 SOX4Q06945 474 aaPredicted RBP14.56□□□□□ -0.08
CLK3-213ENST00000563842 ENOX2Q16206 610 aaKnown RBP14.56□□□□□ -0.08
CLK3-213ENST00000563842 FAM26FQ5R3K3 315 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 SYCE2Q6PIF2 218 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 GJD3Q8N144 294 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 RIPOR3Q96MK2 946 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 NECAB3Q96P71 396 aaPredicted RBP14.56□□□□□ -0.08
CLK3-213ENST00000563842 PHF7Q9BWX1 381 aaPredicted RBP14.56□□□□□ -0.08
CLK3-213ENST00000563842 S1PR5Q9H228 398 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 ADAM7Q9H2U9 754 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 SFXN1Q9H9B4 322 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 DERAQ9Y315 318 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 C2orf16Q68DN1 1984 aa14.56□□□□□ -0.08
CLK3-213ENST00000563842 MYO10Q9HD67 2058 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 PRPF6O94906 941 aaKnown RBP14.55□□□□□ -0.08
CLK3-213ENST00000563842 IL18RAPO95256 599 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 FGFR3P22607 806 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 LRPAP1P30533 357 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 MTHFRP42898 656 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 ACOT2P49753 483 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 CASP5P51878 434 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 CBX2Q14781 532 aaPredicted RBP14.55□□□□□ -0.08
CLK3-213ENST00000563842 ZBTB6Q15916 424 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 PSMD5Q16401 504 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 RTP2Q5QGT7 225 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 CYP26C1Q6V0L0 522 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 ANKS3Q6ZW76 656 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 NT5DC4Q86YG4 428 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 SUSD6Q92537 303 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 C18orf25Q96B23 403 aaPredicted RBP14.55□□□□□ -0.08
CLK3-213ENST00000563842 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 UBE4BO95155 1302 aa14.55□□□□□ -0.08
CLK3-213ENST00000563842 FAM237AA0A1B0GTK4 181 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 GOLGA6L4A6NEF3 574 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 SYN3O14994 580 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 MEFVO15553 781 aaPredicted RBP14.54□□□□□ -0.08
CLK3-213ENST00000563842 ADSSP30520 456 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 MCM4P33991 863 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 SNRPFP62306 86 aaKnown RBP14.54□□□□□ -0.08
CLK3-213ENST00000563842 ZP2Q05996 745 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 KCNA1Q09470 495 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 TMEM132DQ14C87 1099 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 ATAT1Q5SQI0 421 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 RARS2Q5T160 578 aaKnown RBP14.54□□□□□ -0.08
CLK3-213ENST00000563842 ARMCX5Q6P1M9 558 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 APPL2Q8NEU8 664 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 LNX1Q8TBB1 728 aaPredicted RBP14.54□□□□□ -0.08
CLK3-213ENST00000563842 ZNF507Q8TCN5 953 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 CCDC47Q96A33 483 aaKnown RBP14.54□□□□□ -0.08
CLK3-213ENST00000563842 B3GALT6Q96L58 329 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 BLZF1Q9H2G9 400 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 C2CD2Q9Y426 696 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 SCN1AP35498 2009 aa14.54□□□□□ -0.08
CLK3-213ENST00000563842 ARHGEF37A1IGU5 675 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 TISP43B9A030 160 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 H7C4K7 107 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 ACTN4O43707 911 aaKnown RBP14.53□□□□□ -0.08
CLK3-213ENST00000563842 BRCC3P46736 316 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 SPAG1Q07617 926 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 PSMD2Q13200 908 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 CUL4BQ13620 913 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 SPATA1Q5VX52 437 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 JADE1Q6IE81 842 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 PRSS55Q6UWB4 352 aaPredicted RBP14.53□□□□□ -0.08
CLK3-213ENST00000563842 CD300LGQ6UXG3 332 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 C15orf39Q6ZRI6 1047 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 PALB2Q86YC2 1186 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 C3orf58Q8NDZ4 430 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 CMASQ8NFW8 434 aaPredicted RBP14.53□□□□□ -0.08
CLK3-213ENST00000563842 PAGE5Q96GU1 130 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 SUSD3Q96L08 255 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 FAM213AQ9BRX8 229 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 APOL5Q9BWW9 433 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 KIAA1586Q9HCI6 787 aa14.53□□□□□ -0.08
CLK3-213ENST00000563842 MAN1C1Q9NR34 630 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms