RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 CSRNP2Q9H175 543 aa20.05■□□□□ 0.8
E4F1-203ENST00000563643 VPS54Q9P1Q0 977 aa20.05■□□□□ 0.8
E4F1-203ENST00000563643 LIMCH1Q9UPQ0 1083 aa20.05■□□□□ 0.8
E4F1-203ENST00000563643 NEUROG3Q9Y4Z2 214 aa20.05■□□□□ 0.8
E4F1-203ENST00000563643 SPAG17Q6Q759 2223 aa20.04■□□□□ 0.8
E4F1-203ENST00000563643 CTDNEP1O95476 244 aa20.04■□□□□ 0.8
E4F1-203ENST00000563643 PXNP49023 591 aaPredicted RBP20.04■□□□□ 0.8
E4F1-203ENST00000563643 KIAA1211LQ6NV74 962 aa20.04■□□□□ 0.8
E4F1-203ENST00000563643 NECAB1Q8N987 351 aa20.04■□□□□ 0.8
E4F1-203ENST00000563643 BICD2Q8TD16 824 aa20.04■□□□□ 0.8
E4F1-203ENST00000563643 TBC1D32Q96NH3 1257 aa20.04■□□□□ 0.8
E4F1-203ENST00000563643 KLK14Q9P0G3 267 aa20.04■□□□□ 0.8
E4F1-203ENST00000563643 NCANO14594 1321 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 WDR27A2RRH5 827 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 CASTOR2A6NHX0 329 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 SLC38A8A6NNN8 435 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 CSRP1P21291 193 aaKnown RBP20.03■□□□□ 0.8
E4F1-203ENST00000563643 VIPR2P41587 438 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 SOX9P48436 509 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 TUSC3Q13454 348 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 CSGALNACT1Q8TDX6 532 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 ZC3H10Q96K80 434 aaKnown RBP20.03■□□□□ 0.8
E4F1-203ENST00000563643 CORO1BQ9BR76 489 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 BACH2Q9BYV9 841 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 MTRRQ9UBK8 725 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 CDY1Q9Y6F8 540 aa20.03■□□□□ 0.8
E4F1-203ENST00000563643 CCDC163A0A0D9SF12 145 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 HYAL3O43820 417 aaPredicted RBP20.02■□□□□ 0.8
E4F1-203ENST00000563643 EXTL3O43909 919 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 PSMD10O75832 226 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 MICAL2O94851 1124 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 LRG1P02750 347 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 CCR2P41597 374 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 KPNA1P52294 538 aaPredicted RBP20.02■□□□□ 0.8
E4F1-203ENST00000563643 NPEPPSP55786 919 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 NCBP1Q09161 790 aaKnown RBP20.02■□□□□ 0.8
E4F1-203ENST00000563643 ELAVL2Q12926 359 aaKnown RBP20.02■□□□□ 0.8
E4F1-203ENST00000563643 PCBP1Q15365 356 aaKnown RBP eCLIP20.02■□□□□ 0.82e-6■■■■□ 20
E4F1-203ENST00000563643 TXNDC11Q6PKC3 985 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 PDZD3Q86UT5 571 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 ZSWIM3Q96MP5 696 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 AIFM3Q96NN9 605 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 C8orf33Q9H7E9 229 aaPredicted RBP20.02■□□□□ 0.8
E4F1-203ENST00000563643 MSRB2Q9Y3D2 182 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 GPSM3Q9Y4H4 160 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 ZMYM2Q9UBW7 1377 aa20.02■□□□□ 0.8
E4F1-203ENST00000563643 CELSR3Q9NYQ7 3312 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 LNP1A1A4G5 178 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 ZNF197O14709 1029 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 AKAP3O75969 853 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 NLRP5P59047 1200 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 SPIRE1Q08AE8 756 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 CCINQ13939 588 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.01■□□□□ 0.79
E4F1-203ENST00000563643 MFSD6LQ8IWD5 586 aa20.01■□□□□ 0.79
E4F1-203ENST00000563643 ZNF579Q8NAF0 562 aaKnown RBP20.01■□□□□ 0.79
E4F1-203ENST00000563643 ZSCAN31Q96LW9 406 aaPredicted RBP20.01■□□□□ 0.79
E4F1-203ENST00000563643 DHX33Q9H6R0 707 aaKnown RBP20.01■□□□□ 0.79
E4F1-203ENST00000563643 BMP2KQ9NSY1 1161 aaPredicted RBP20.01■□□□□ 0.79
E4F1-203ENST00000563643 ORC3Q9UBD5 711 aaPredicted RBP20.01■□□□□ 0.79
E4F1-203ENST00000563643 ARHGEF37A1IGU5 675 aa20■□□□□ 0.79
E4F1-203ENST00000563643 ST3GAL1Q11201 340 aa20■□□□□ 0.79
E4F1-203ENST00000563643 PLK5Q496M5 336 aa20■□□□□ 0.79
E4F1-203ENST00000563643 GALNT17Q6IS24 598 aa20■□□□□ 0.79
E4F1-203ENST00000563643 C19orf48Q6RUI8 117 aa20■□□□□ 0.79
E4F1-203ENST00000563643 B3GNT9Q6UX72 402 aa20■□□□□ 0.79
E4F1-203ENST00000563643 PDZD4Q76G19 769 aaPredicted RBP20■□□□□ 0.79
E4F1-203ENST00000563643 FERMT3Q86UX7 667 aa20■□□□□ 0.79
E4F1-203ENST00000563643 DAGLBQ8NCG7 672 aa20■□□□□ 0.79
E4F1-203ENST00000563643 NSUN7Q8NE18 718 aaKnown RBP20■□□□□ 0.79
E4F1-203ENST00000563643 WASF1Q92558 559 aa20■□□□□ 0.79
E4F1-203ENST00000563643 TRPV4Q9HBA0 871 aa20■□□□□ 0.79
E4F1-203ENST00000563643 PARP2Q9UGN5 583 aa20■□□□□ 0.79
E4F1-203ENST00000563643 KLK13Q9UKR3 277 aa20■□□□□ 0.79
E4F1-203ENST00000563643 PCDHA4Q9UN74 947 aa20■□□□□ 0.79
E4F1-203ENST00000563643 MYBPHLA2RUH7 354 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 SPECC1L-ADORA2AF8WAN1 911 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 EDIL3O43854 480 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 FDPSP14324 419 aaKnown RBP19.99■□□□□ 0.79
E4F1-203ENST00000563643 ARF4P18085 180 aaPredicted RBP19.99■□□□□ 0.79
E4F1-203ENST00000563643 CTHP32929 405 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 PSMC5P62195 406 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 PROSER1Q86XN7 944 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 SYNPOQ8N3V7 929 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 ZSCAN18Q8TBC5 510 aaPredicted RBP19.99■□□□□ 0.79
E4F1-203ENST00000563643 FAM200AQ8TCP9 573 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 ANKFY1Q9P2R3 1169 aa19.99■□□□□ 0.79
E4F1-203ENST00000563643 VWA8A3KMH1 1905 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 ADAMTS20P59510 1910 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 HEPACAM2A8MVW5 462 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 INO80B-WBP1J3KQ70 363 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 ASAP2O43150 1006 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 CAVIN2O95810 425 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 XBP1P17861 261 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 FGFR3P22607 806 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 RFC5P40937 340 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 CREB5Q02930 508 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 NPY5RQ15761 445 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 AMHR2Q16671 573 aa19.98■□□□□ 0.79
E4F1-203ENST00000563643 RALGPS2Q86X27 583 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms