RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 KIF5CO60282 957 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 TRPA1O75762 1119 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 LCA5LO95447 670 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 DLATP10515 647 aaKnown RBP10.47□□□□□ -0.73
UBFD1-202ENST00000563366 CYP2C9P11712 490 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 CST5P28325 142 aaPredicted RBP10.47□□□□□ -0.73
UBFD1-202ENST00000563366 AXLP30530 894 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 HOXC8P31273 242 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 SLC19A1P41440 591 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 PRKCIP41743 596 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 KIF11P52732 1056 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 MFAP3P55082 362 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 JAM2P57087 298 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 NLRP11P59045 1033 aaKnown RBP10.47□□□□□ -0.73
UBFD1-202ENST00000563366 ETF1P62495 437 aaKnown RBP10.47□□□□□ -0.73
UBFD1-202ENST00000563366 DLG4P78352 724 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 PPP3CAQ08209 521 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 KLHL30Q0D2K2 578 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 EML3Q32P44 896 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 GNASQ5JWF2 1037 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 VASH1Q7L8A9 365 aaPredicted RBP10.47□□□□□ -0.73
UBFD1-202ENST00000563366 KIAA1328Q86T90 577 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 RSPH3Q86UC2 560 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 WDR49Q8IV35 697 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 KIAA0319LQ8IZA0 1049 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 PCSK9Q8NBP7 692 aaKnown RBP10.47□□□□□ -0.73
UBFD1-202ENST00000563366 RAET1EQ8TD07 263 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 KAT2BQ92831 832 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 JAKMIP2Q96AA8 810 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 NT5C1BQ96P26 610 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 CHP1Q99653 195 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 CGRRF1Q99675 332 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 FDXACB1Q9BRP7 624 aaPredicted RBP10.47□□□□□ -0.73
UBFD1-202ENST00000563366 TMEM117Q9H0C3 514 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 SIX2Q9NPC8 291 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 XPNPEP3Q9NQH7 507 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 C1orf112Q9NSG2 853 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 DNAJC12Q9UKB3 198 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 FHOD1Q9Y613 1164 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 ATP8B3O60423 1300 aa10.47□□□□□ -0.73
UBFD1-202ENST00000563366 F8VZ95 297 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 M0QZ92 97 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 GPR25O00155 361 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 FKTNO75072 461 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 CABYRO75952 493 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 VTNP04004 478 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 ACTN1P12814 892 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 SOX5P35711 763 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 ACOT2P49753 483 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 ADAM17P78536 824 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 GCNT1Q02742 428 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 MAP2K1Q02750 393 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-202ENST00000563366 CACNB2Q08289 660 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-202ENST00000563366 PDE4CQ08493 712 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 KIF5AQ12840 1032 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 MTF1Q14872 753 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 DCAF4L1Q3SXM0 396 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 ZACNQ401N2 412 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 WDR44Q5JSH3 913 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 C1orf220Q5T0J3 134 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 C15orf39Q6ZRI6 1047 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 RNF180Q86T96 592 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 NT5DC4Q86YG4 428 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 TRPV1Q8NER1 839 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 LENG1Q96BZ8 264 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-202ENST00000563366 KCTD15Q96SI1 283 aaPredicted RBP10.46□□□□□ -0.73
UBFD1-202ENST00000563366 DESI2Q9BSY9 194 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 IFIH1Q9BYX4 1025 aaKnown RBP10.46□□□□□ -0.73
UBFD1-202ENST00000563366 PTPRHQ9HD43 1115 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 RAB20Q9NX57 234 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 ARHGAP20Q9P2F6 1191 aa10.46□□□□□ -0.73
UBFD1-202ENST00000563366 CPSF3Q9UKF6 684 aaKnown RBP10.46□□□□□ -0.73
UBFD1-202ENST00000563366 RBAK-RBAKDNI3L0D1 243 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 ABLIM1O14639 778 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 FAM189A1O60320 539 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 CLTAP09496 248 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 HARSP12081 509 aaKnown RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 TBXAS1P24557 533 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 EIF4A3P38919 411 aaKnown RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 PIK3CAP42336 1068 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 VEGFBP49765 207 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 VAV2P52735 878 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 TERF1P54274 439 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 CHMP4BP1P59074 171 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 BEX3Q00994 111 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 BIRC3Q13489 604 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 BMS1Q14692 1282 aaKnown RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 SLC18A3Q16572 532 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 MAP3K21Q5TCX8 1036 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 HGSNATQ68CP4 663 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 IQCEQ6IPM2 695 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 DPY19L2P1Q6NXN4 242 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 NOTUMQ6P988 496 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 TRAF7Q6Q0C0 670 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 CRELD2Q6UXH1 353 aaPredicted RBP10.45□□□□□ -0.74
UBFD1-202ENST00000563366 SV2AQ7L0J3 742 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 SESTD1Q86VW0 696 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 CD302Q8IX05 232 aa10.45□□□□□ -0.74
UBFD1-202ENST00000563366 LMO3Q8TAP4 145 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms