RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 RALGAPA2Q2PPJ7 1873 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 TMEM265A0A087WTH1 108 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 B4GALT3O60512 393 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 ARHGEF15O94989 841 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 LRPAP1P30533 357 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 GTF2H1P32780 548 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 CLCNKBP51801 687 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 TFAMQ00059 246 aaKnown RBP13.79□□□□□ -0.2
CDH11-205ENST00000562882 SOX4Q06945 474 aaPredicted RBP13.79□□□□□ -0.2
CDH11-205ENST00000562882 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 IRF2BP1Q8IU81 584 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 PLEKHO2Q8TD55 490 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 ZNF516Q92618 1163 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 ANKRD36BP1Q96IX9 119 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 C17orf80Q9BSJ5 609 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 SPG21Q9NZD8 308 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 TUBGCP4Q9UGJ1 667 aa13.79□□□□□ -0.2
CDH11-205ENST00000562882 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 CASTOR2A6NHX0 329 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 LRRIQ3A6PVS8 624 aaPredicted RBP13.78□□□□□ -0.2
CDH11-205ENST00000562882 TULP1O00294 542 aaPredicted RBP13.78□□□□□ -0.2
CDH11-205ENST00000562882 PIRO00625 290 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 STX10O60499 249 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 TNNC2P02585 160 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 PPM1AP35813 382 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 OR1G1P47890 313 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 SLC11A1P49279 550 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 ZNF165P49910 485 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 DLG4P78352 724 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 PLCB3Q01970 1234 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 MYL5Q02045 173 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 LRSAM1Q6UWE0 723 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 FAM114A1Q8IWE2 563 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 OR5B17Q8NGF7 314 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 LRCH3Q96II8 777 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 PAAF1Q9BRP4 392 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 ZNF576Q9H609 170 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 STK39Q9UEW8 545 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 ITGA11Q9UKX5 1188 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 NFE2L3Q9Y4A8 694 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
CDH11-205ENST00000562882 PDCD11Q14690 1871 aaKnown RBP13.78□□□□□ -0.2
CDH11-205ENST00000562882 SMTNL1A8MU46 457 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 PODXLO00592 558 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 C4BPAP04003 597 aaKnown RBP13.77□□□□□ -0.21
CDH11-205ENST00000562882 TMEM191BP0C7N4 346 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 PAX3P23760 479 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 CTNNB1P35222 781 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 ZNF445P59923 1031 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 KRT17Q04695 432 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 NCAPHQ15003 741 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 C9orf57Q5W0N0 161 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 TRAPPC11Q7Z392 1133 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 TRIM59Q8IWR1 403 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 SLC39A11Q8N1S5 342 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 C1orf127Q8N9H9 656 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 IGSF21Q96ID5 467 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 ANP32EQ9BTT0 268 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
CDH11-205ENST00000562882 MTMR12Q9C0I1 747 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 FANCLQ9NW38 375 aa13.77□□□□□ -0.21
CDH11-205ENST00000562882 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 H3BNC9 293 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 TADA2AO75478 443 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 FGF18O76093 207 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 B3GAT3O94766 335 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 EFEMP2O95967 443 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 ITGB3P05106 788 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 PBX3P40426 434 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 RBP5P82980 135 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 ZACNQ401N2 412 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 LMBRD2Q68DH5 695 aaPredicted RBP13.76□□□□□ -0.21
CDH11-205ENST00000562882 CD300LGQ6UXG3 332 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 DDX53Q86TM3 631 aaKnown RBP13.76□□□□□ -0.21
CDH11-205ENST00000562882 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
CDH11-205ENST00000562882 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 RABGGTAQ92696 567 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 SLC35C1Q96A29 364 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
CDH11-205ENST00000562882 TMEM8AQ9HCN3 771 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 SAMSN1Q9NSI8 373 aaKnown RBP13.76□□□□□ -0.21
CDH11-205ENST00000562882 MARCH5Q9NX47 278 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 MAGEC2Q9UBF1 373 aaPredicted RBP13.76□□□□□ -0.21
CDH11-205ENST00000562882 CACNG4Q9UBN1 327 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 PUF60Q9UHX1 559 aaKnown RBP13.76□□□□□ -0.21
CDH11-205ENST00000562882 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 MTUS1Q9ULD2 1270 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 LZTS1Q9Y250 596 aa13.76□□□□□ -0.21
CDH11-205ENST00000562882 PMM2O15305 246 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms