RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 ACAD10Q6JQN1 1059 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 CCDC137Q6PK04 289 aaKnown RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 SLC13A5Q86YT5 568 aaPredicted RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 MAP4K3Q8IVH8 894 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 CCDC105Q8IYK2 499 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 DAW1Q8N136 415 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 GBP7Q8N8V2 638 aaPredicted RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 CCDC197Q8NCU1 140 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 BANK1Q8NDB2 785 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 ARMC2Q8NEN0 867 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 OLIG1Q8TAK6 271 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 ZNF564Q8TBZ8 553 aaPredicted RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 MAGEC3Q8TD91 643 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 ATP8B4Q8TF62 1192 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 SLC16A10Q8TF71 515 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 LRRN4Q8WUT4 740 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 C7orf43Q8WVR3 580 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 CD101Q93033 1021 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 ATP6V0A1Q93050 837 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 ART4Q93070 314 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 VCPIP1Q96JH7 1222 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 MFSD14AQ96MC6 490 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 SERPINB12Q96P63 405 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 XPO6Q96QU8 1125 aaKnown RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 FAM117AQ9C073 453 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 DPH5Q9H2P9 285 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 PPCSQ9HAB8 311 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 MRPL47Q9HD33 250 aaKnown RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 PPANQ9NQ55 473 aaKnown RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 SAMD15Q9P1V8 674 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 NOCTQ9UK39 431 aaKnown RBP8.01□□□□□ -1.13
CFDP1-202ENST00000562602 TBX20Q9UMR3 447 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 SAMM50Q9Y512 469 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 CAPN7Q9Y6W3 813 aa8.01□□□□□ -1.13
CFDP1-202ENST00000562602 TNS1Q9HBL0 1735 aaKnown RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 TCP10L2B9ZVM9 353 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 RASGRF2O14827 1237 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 DHX15O43143 795 aaKnown RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 LRRN2O75325 713 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 TCEA3O75764 348 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 CYP11B1P15538 503 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 ITGB5P18084 799 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 RDXP35241 583 aaKnown RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 ECE1P42892 770 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 GCLMP48507 274 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 OAZ1P54368 228 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 PLTPP55058 493 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 PPP3CAQ08209 521 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 IFT88Q13099 833 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 NR1H3Q13133 447 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 MESDQ14696 234 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 SKIV2LQ15477 1246 aaKnown RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 TRADDQ15628 312 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 SNRNP35Q16560 246 aaKnown RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 DCAF12L1Q5VU92 463 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 SLFN12LQ6IEE8 588 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 PPP1R3FQ6ZSY5 799 aaPredicted RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 CCDC91Q7Z6B0 441 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 DDX42Q86XP3 938 aaKnown RBP eCLIP8□□□□□ -1.13
CFDP1-202ENST00000562602 PRELID2Q8N945 189 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 ACER1Q8TDN7 264 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 EPS8L1Q8TE68 723 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 IPO4Q8TEX9 1081 aaKnown RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 RAPGEF5Q92565 580 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 ZNF653Q96CK0 615 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 GPRASP2Q96D09 838 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 ARHGEF26Q96DR7 871 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 SEC16BQ96JE7 1060 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 IFT74Q96LB3 600 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 CCDC114Q96M63 670 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 FBXL18Q96ME1 805 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 GMLQ99445 158 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 NUP85Q9BW27 656 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 KIAA1683Q9H0B3 1180 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 TMEM117Q9H0C3 514 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 NEUROG2Q9H2A3 272 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 PLEKHA4Q9H4M7 779 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 YY1AP1Q9H869 796 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 RAB20Q9NX57 234 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 DDX20Q9UHI6 824 aaKnown RBP8□□□□□ -1.13
CFDP1-202ENST00000562602 MAP4K5Q9Y4K4 846 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 PCDHB2Q9Y5E7 798 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 PCDHA10Q9Y5I2 948 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 ACTL7BQ9Y614 415 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 SCINQ9Y6U3 715 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 SIPA1L1O43166 1804 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 ANKRD31Q8N7Z5 1873 aa8□□□□□ -1.13
CFDP1-202ENST00000562602 A0A1B0GUA9 196 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 CFAP73A6NFT4 308 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 CHUKO15111 745 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 PSTPIP1O43586 416 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 CTNND1O60716 968 aaKnown RBP7.99□□□□□ -1.13
CFDP1-202ENST00000562602 LDHAP00338 332 aaKnown RBP7.99□□□□□ -1.13
CFDP1-202ENST00000562602 PSAPP07602 524 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 CCND2P30279 289 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 HNRNPH1P31943 449 aaKnown RBP7.99□□□□□ -1.13
CFDP1-202ENST00000562602 SLC8A1P32418 973 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 MNAT1P51948 309 aa7.99□□□□□ -1.13
CFDP1-202ENST00000562602 AP3M2P53677 418 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms