RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 POU3F3P20264 500 aaPredicted RBP17.71■□□□□ 0.43
USB1-206ENST00000562534 AP3M2P53677 418 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 TFAMQ00059 246 aaKnown RBP17.71■□□□□ 0.43
USB1-206ENST00000562534 SOX4Q06945 474 aaPredicted RBP17.71■□□□□ 0.43
USB1-206ENST00000562534 NFKBIBQ15653 356 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 TTI2Q6NXR4 508 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 Q7L0L9 218 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 WDR49Q8IV35 697 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 ZC3H3Q8IXZ2 948 aaKnown RBP17.71■□□□□ 0.43
USB1-206ENST00000562534 FAM186BQ8IYM0 893 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 PARD3BQ8TEW8 1205 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 POF1BQ8WVV4 589 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 ANKRD36BP1Q96IX9 119 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 INTS13Q9NVM9 706 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 ANO10Q9NW15 660 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 ADAM28Q9UKQ2 775 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 CTNND2Q9UQB3 1225 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 TRIM49BA6NDI0 452 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 PODXLO00592 558 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 GRM6O15303 877 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 TNNC2P02585 160 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 DLATP10515 647 aaKnown RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 EPB41P11171 864 aaKnown RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 MCCD1P59942 119 aaPredicted RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 CLDN10P78369 228 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 ELAVL2Q12926 359 aaKnown RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 DPCR1Q3MIW9 517 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 EFCAB13Q8IY85 973 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 CSGALNACT2Q8N6G5 542 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 RABGGTAQ92696 567 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 CDX2Q99626 313 aaPredicted RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 DUSP9Q99956 384 aaKnown RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 METTL14Q9HCE5 456 aaKnown RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
USB1-206ENST00000562534 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 TDRD15B5MCY1 1934 aaKnown RBP17.7■□□□□ 0.42
USB1-206ENST00000562534 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 SLC16A3O15427 465 aaKnown RBP17.69■□□□□ 0.42
USB1-206ENST00000562534 LPXNO60711 386 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 GNA14O95837 355 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 VAMP7P51809 220 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 WNT7BP56706 349 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 STX17P56962 302 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 TMEM173Q86WV6 379 aaPredicted RBP17.69■□□□□ 0.42
USB1-206ENST00000562534 MICAL1Q8TDZ2 1067 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 MRPL38Q96DV4 380 aaKnown RBP17.69■□□□□ 0.42
USB1-206ENST00000562534 EEF2KMTQ96G04 330 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
USB1-206ENST00000562534 CGRRF1Q99675 332 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 SRRTQ9BXP5 876 aaKnown RBP17.69■□□□□ 0.42
USB1-206ENST00000562534 NGRNQ9NPE2 291 aaKnown RBP17.69■□□□□ 0.42
USB1-206ENST00000562534 MARCH5Q9NX47 278 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 SSX2IPQ9Y2D8 614 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 NUB1Q9Y5A7 615 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 TRIP11Q15643 1979 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 RALGAPA2Q2PPJ7 1873 aa17.69■□□□□ 0.42
USB1-206ENST00000562534 PIRO00625 290 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 RBP5P82980 135 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 STX1AQ16623 288 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 TPD52L1Q16890 204 aaPredicted RBP17.68■□□□□ 0.42
USB1-206ENST00000562534 C9orf57Q5W0N0 161 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 FRMD5Q7Z6J6 570 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 GDPD5Q8WTR4 605 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 TLR9Q9NR96 1032 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 CACNG4Q9UBN1 327 aa17.68■□□□□ 0.42
USB1-206ENST00000562534 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.42
USB1-206ENST00000562534 LAMA2P24043 3122 aaKnown RBP17.67■□□□□ 0.42
USB1-206ENST00000562534 STX10O60499 249 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 KIF4AO95239 1232 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 CXCL14O95715 111 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 EFEMP2O95967 443 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 SOD2P04179 222 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 IGFBP4P22692 258 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 DNAJB1P25685 340 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 PNPLA4P41247 253 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 BFSP1Q12934 665 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 CAMK1Q14012 370 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 USP41Q3LFD5 358 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 KIAA1841Q6NSI8 718 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 TRAPPC11Q7Z392 1133 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 GPR65Q8IYL9 337 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 BCL7CQ8WUZ0 217 aaPredicted RBP17.67■□□□□ 0.42
USB1-206ENST00000562534 ZNF516Q92618 1163 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 BORCS6Q96GS4 357 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 GPR62Q9BZJ7 368 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 ARMCX3Q9UH62 379 aaPredicted RBP17.67■□□□□ 0.42
USB1-206ENST00000562534 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 LAMA3Q16787 3333 aa17.67■□□□□ 0.42
USB1-206ENST00000562534 LRRIQ3A6PVS8 624 aaPredicted RBP17.66■□□□□ 0.42
USB1-206ENST00000562534 F8W810 466 aa17.66■□□□□ 0.42
USB1-206ENST00000562534 PHACTR2O75167 634 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms