RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PAK2Q13177 524 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 MTFR1Q15390 333 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 ASTE1Q2TB18 679 aaPredicted RBP15.37■□□□□ 0.05
COMMD4-205ENST00000562310 UBXN11Q5T124 520 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 TWF2Q6IBS0 349 aaKnown RBP15.37■□□□□ 0.05
COMMD4-205ENST00000562310 ZNF662Q6ZS27 426 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 REXO1L1PQ8IX06 675 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 FAM71AQ8IYT1 594 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 ACRBPQ8NEB7 543 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 KREMEN1Q96MU8 473 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 ERVK-5Q9HDB9 667 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 ST3GAL5Q9UNP4 418 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 ATP8B3O60423 1300 aa15.37■□□□□ 0.05
COMMD4-205ENST00000562310 TRIP11Q15643 1979 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 TANC1Q9C0D5 1861 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 XPOTO43592 962 aaKnown RBP15.36■□□□□ 0.05
COMMD4-205ENST00000562310 LRRN2O75325 713 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 RECQL4O94761 1208 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 PLEKP08567 350 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-205ENST00000562310 ATICP31939 592 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 CDK7P50613 346 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 YWHAEP62258 255 aaKnown RBP15.36■□□□□ 0.05
COMMD4-205ENST00000562310 CUL2Q13617 745 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 PTPN14Q15678 1187 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 SLC18A3Q16572 532 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 ZNF699Q32M78 642 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 C10orf76Q5T2E6 689 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 NYAP1Q6ZVC0 841 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 KIAA1328Q86T90 577 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 PI4K2AQ9BTU6 479 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 TSGA10Q9BZW7 698 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 NIF3L1Q9GZT8 377 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 NXF3Q9H4D5 531 aaKnown RBP15.36■□□□□ 0.05
COMMD4-205ENST00000562310 HAUS4Q9H6D7 363 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 SNTG2Q9NY99 539 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 CNTN3Q9P232 1028 aa15.36■□□□□ 0.05
COMMD4-205ENST00000562310 R3HCC1Q9Y3T6 440 aaKnown RBP15.36■□□□□ 0.05
COMMD4-205ENST00000562310 FOXN3O00409 490 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 TLR3O15455 904 aaKnown RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 MEFVO15553 781 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 CLSTN1O94985 981 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 STAU1O95793 577 aaKnown RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 CKBP12277 381 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 SKIP12755 728 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 ZSCAN20P17040 1043 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 CAPN2P17655 700 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 VAV2P52735 878 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 BPIFB4P59827 614 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 PTK2Q05397 1052 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 NFX1Q12986 1120 aaKnown RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 BFSP2Q13515 415 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 BMS1Q14692 1282 aaKnown RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 LPIN1Q14693 890 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 ARHGAP29Q52LW3 1261 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 C1orf127Q8N9H9 656 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 BEST2Q8NFU1 509 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 TATDN2Q93075 761 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 ARMC5Q96C12 935 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 KIF12Q96FN5 646 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 ZNF333Q96JL9 665 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 FAM84AQ96KN4 292 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 C16orf45Q96MC5 204 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 TRAIPQ9BWF2 469 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 IFIH1Q9BYX4 1025 aaKnown RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 TRPV6Q9H1D0 765 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 FAM124BQ9H5Z6 455 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 VRTNQ9H8Y1 702 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 REXO2Q9Y3B8 237 aaKnown RBP15.35■□□□□ 0.05
COMMD4-205ENST00000562310 IPPQ9Y573 584 aa15.35■□□□□ 0.05
COMMD4-205ENST00000562310 GHRP10912 638 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 P4HA1P13674 534 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 KCNE1P15382 129 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-205ENST00000562310 MYL6P60660 151 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 RBP5P82980 135 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 XKR4Q5GH76 650 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 ZNF618Q5T7W0 954 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-205ENST00000562310 ZNF571Q7Z3V5 609 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-205ENST00000562310 FAM126BQ8IXS8 530 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 KAT5Q92993 513 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.34■□□□□ 0.05
COMMD4-205ENST00000562310 APOBEC3GQ9HC16 384 aaKnown RBP15.34■□□□□ 0.05
COMMD4-205ENST00000562310 FAM105AQ9NUU6 356 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 DPP3Q9NY33 737 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 PADI3Q9ULW8 664 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 UBQLN1Q9UMX0 589 aaKnown RBP15.34■□□□□ 0.05
COMMD4-205ENST00000562310 PCDHB2Q9Y5E7 798 aa15.34■□□□□ 0.05
COMMD4-205ENST00000562310 KRT86O43790 486 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 CD4P01730 458 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 ITGB3P05106 788 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 KRT19P08727 400 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 PNMA6AP0CW24 399 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-205ENST00000562310 CD52P31358 61 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 USP8P40818 1118 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 PDE6CP51160 858 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 DSC3Q14574 896 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 ZNF667Q5HYK9 610 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms