RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 NT5C1B-RDH14C9J2C7 533 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 PIRO00625 290 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 XPOTO43592 962 aaKnown RBP14.56□□□□□ -0.08
CDH1-204ENST00000562118 CALUO43852 315 aaPredicted RBP14.56□□□□□ -0.08
CDH1-204ENST00000562118 SOD2P04179 222 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 CTSAP10619 480 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 FOSL2P15408 326 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 PAX3P23760 479 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 IGFBP6P24592 240 aaPredicted RBP14.56□□□□□ -0.08
CDH1-204ENST00000562118 CCNE1P24864 410 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 OR1G1P47890 313 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 PMS1P54277 932 aaKnown RBP14.56□□□□□ -0.08
CDH1-204ENST00000562118 ERVFC1P60507 584 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 KRT17Q04695 432 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 TMEM132DQ14C87 1099 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 CAMK4Q16566 473 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 TIGD5Q53EQ6 642 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 DCLRE1AQ6PJP8 1040 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 PLEKHO2Q8TD55 490 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 KIF12Q96FN5 646 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 BORCS6Q96GS4 357 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 MKNK1Q9BUB5 465 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 COLEC11Q9BWP8 271 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 MAPK8IP1Q9UQF2 711 aa14.56□□□□□ -0.08
CDH1-204ENST00000562118 BRWD1Q9NSI6 2320 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 PLXNA3P51805 1871 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 MTCL1Q9Y4B5 1905 aaKnown RBP14.55□□□□□ -0.08
CDH1-204ENST00000562118 GOLGA8IPA6NC78 632 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 GOLGA8JA6NMD2 632 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 PODXLO00592 558 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 IRS1P35568 1242 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 DSG1Q02413 1049 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 KCNC3Q14003 757 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 SURF1Q15526 300 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 KIAA0319Q5VV43 1072 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 TTI2Q6NXR4 508 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 FUT10Q6P4F1 479 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 WDR49Q8IV35 697 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 PARD3BQ8TEW8 1205 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 MED15Q96RN5 788 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 GPR62Q9BZJ7 368 aa14.55□□□□□ -0.08
CDH1-204ENST00000562118 NGRNQ9NPE2 291 aaKnown RBP14.55□□□□□ -0.08
CDH1-204ENST00000562118 PRG3Q9Y2Y8 225 aaPredicted RBP14.55□□□□□ -0.08
CDH1-204ENST00000562118 SF3B1O75533 1304 aaKnown RBP eCLIP14.55□□□□□ -0.08
CDH1-204ENST00000562118 M0QZQ0 153 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 PSMA7O14818 248 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 AKAP3O75969 853 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 C1RP00736 705 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 FGFR3P22607 806 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 NR2F2P24468 414 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 CASP4P49662 377 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 CYP2J2P51589 502 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 SPAG1Q07617 926 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 PTPN14Q15678 1187 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 CTC1Q2NKJ3 1217 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 C1orf220Q5T0J3 134 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 C9orf57Q5W0N0 161 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 ANKRD40Q6AI12 368 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 TMEM130Q8N3G9 435 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 C1orf127Q8N9H9 656 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 BEST2Q8NFU1 509 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 TMC2Q8TDI7 906 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 SUSD3Q96L08 255 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 CGRRF1Q99675 332 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 DUSP9Q99956 384 aaKnown RBP14.54□□□□□ -0.08
CDH1-204ENST00000562118 NSUN3Q9H649 340 aaKnown RBP14.54□□□□□ -0.08
CDH1-204ENST00000562118 RXFP1Q9HBX9 757 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 PDE11AQ9HCR9 933 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 INTS13Q9NVM9 706 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 PUF60Q9UHX1 559 aaKnown RBP14.54□□□□□ -0.08
CDH1-204ENST00000562118 SIX4Q9UIU6 781 aa14.54□□□□□ -0.08
CDH1-204ENST00000562118 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 SLC16A3O15427 465 aaKnown RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 TBC1D4O60343 1298 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 EXOC3O60645 756 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 PAPLNO95428 1278 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 RPL13P26373 211 aaKnown RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 ELAVL2Q12926 359 aaKnown RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 MRPL58Q14197 206 aaKnown RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 CT47A1Q5JQC4 288 aaPredicted RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 C15orf39Q6ZRI6 1047 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 TAS1R1Q7RTX1 841 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 LIMS2Q7Z4I7 341 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 VPS52Q8N1B4 723 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 MRPL43Q8N983 215 aaKnown RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 MLKLQ8NB16 471 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 CDCA3Q99618 268 aaPredicted RBP14.53□□□□□ -0.08
CDH1-204ENST00000562118 TCF25Q9BQ70 676 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 ITGA11Q9UKX5 1188 aa14.53□□□□□ -0.08
CDH1-204ENST00000562118 TRIM49BA6NDI0 452 aa14.52□□□□□ -0.09
CDH1-204ENST00000562118 BIN1O00499 593 aa14.52□□□□□ -0.09
CDH1-204ENST00000562118 PPEF2O14830 753 aa14.52□□□□□ -0.09
CDH1-204ENST00000562118 SYN3O14994 580 aa14.52□□□□□ -0.09
CDH1-204ENST00000562118 B3GAT3O94766 335 aa14.52□□□□□ -0.09
CDH1-204ENST00000562118 SLC34A2O95436 690 aa14.52□□□□□ -0.09
CDH1-204ENST00000562118 STAU1O95793 577 aaKnown RBP14.52□□□□□ -0.09
CDH1-204ENST00000562118 GUCY2FP51841 1108 aa14.52□□□□□ -0.09
CDH1-204ENST00000562118 MARSP56192 900 aaKnown RBP14.52□□□□□ -0.09
CDH1-204ENST00000562118 LILRA4P59901 499 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms