RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 STK33Q9BYT3 514 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 APEX2Q9UBZ4 518 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 TEKT2Q9UIF3 430 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 PHTF1Q9UMS5 762 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 SLC8A2Q9UPR5 921 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ATP11BQ9Y2G3 1177 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ARHGEF5Q12774 1597 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CAND2O75155 1236 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ACADSP16219 412 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 INPP5AQ14642 412 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 KCNK16Q96T55 309 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ROPN1BQ9BZX4 212 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CAAP1Q9H8G2 361 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ROPN1Q9HAT0 212 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 RRAGCQ9HB90 399 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 GH2P01242 217 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ZNF200P98182 395 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 TSPY1Q01534 308 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ITIH4Q14624 930 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 MAPRE2Q15555 327 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ALX1Q15699 326 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ZC3H12BQ5HYM0 836 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 ARMCX2Q7L311 632 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 PLD3Q8IV08 490 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 EXOC8Q8IYI6 725 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 RNF139Q8WU17 664 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 C7orf25Q9BPX7 421 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 BSDC1Q9NW68 430 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CAPN6Q9Y6Q1 641 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 A0A1W2PQJ5 194 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 H0Y626 953 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 TRIM16O95361 564 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 GPC3P51654 580 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 NME3Q13232 169 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 KDELC2Q7Z4H8 507 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 INPP5DQ92835 1189 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 RGL1Q9NZL6 768 aa10.74□□□□□ -0.69
GTF3C1-202ENST00000561623 APRTP07741 180 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 MYBP10242 640 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 C3orf62Q6ZUJ4 267 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 IFNEQ86WN2 208 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 IGDCC4Q8TDY8 1250 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 NMD3Q96D46 503 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 CARD9Q9H257 536 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 ZC3H7BQ9UGR2 993 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 APOL1O14791 398 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 ORC4O43929 436 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 GYS1P13807 737 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 MLH1P40692 756 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 SLC1A1P43005 524 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 ANTXR2P58335 489 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 CHI3L2Q15782 390 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 TRIM60Q495X7 471 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 FAM20AQ96MK3 541 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 SLC13A4Q9UKG4 626 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 PDXKO00764 312 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 ANGPT2O15123 496 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 PDE5AO76074 875 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 TBXAS1P24557 533 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 JAK3P52333 1124 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 LBRQ14739 615 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 PGBD4Q96DM1 585 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 CDHR1Q96JP9 859 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 FUCA2Q9BTY2 467 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 C16orf89Q6UX73 402 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 CLEC4FQ8N1N0 589 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 ZFYVE28Q9HCC9 887 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 DONSONQ9NYP3 566 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 BFARQ9NZS9 450 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 V9GYQ6 96 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 UBOX5O94941 541 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 WEE2P0C1S8 567 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 HERVK_113P62684 666 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 DEFB132Q7Z7B7 95 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 RCOR2Q8IZ40 523 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 GIMAP8Q8ND71 665 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 MRPL1Q9BYD6 325 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 CCSER1Q9C0I3 900 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 HSPBP1Q9NZL4 362 aa10.73□□□□□ -0.69
GTF3C1-202ENST00000561623 SYNDIG1LA6NDD5 238 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 FMO5P49326 533 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 USP11P51784 963 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 KCNMA1Q12791 1236 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 CYFIP1Q7L576 1253 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ZNF555Q8NEP9 628 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 PDCD6IPQ8WUM4 868 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 C18orf8Q96DM3 657 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 OSBPL8Q9BZF1 889 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 GIMAP4Q9NUV9 329 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 HEY2Q9UBP5 337 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 DDX20Q9UHI6 824 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 ALG6Q9Y672 507 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 VCPP55072 806 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 FOXO4P98177 505 aa10.72□□□□□ -0.69
GTF3C1-202ENST00000561623 CCDC15Q0P6D6 951 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms