RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431		A0A0A6YYK5	440 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	C9orf118	A6NHY6	69 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	AP1G1	O43747	822 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	B4GALT4	O60513	344 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	LTA4H	P09960	611 aa	Known RBP	4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	GFOD2	Q3B7J2	385 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	ARHGAP29	Q52LW3	1261 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	PPP4R4	Q6NUP7	873 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	ZNF761	Q86XN6	746 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	SLC41A1	Q8IVJ1	513 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	KBTBD2	Q8IY47	623 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	GRAMD1C	Q8IYS0	662 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	PLA2G15	Q8NCC3	412 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	GPR156	Q8NFN8	814 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	OR14K1	Q8NGZ2	314 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	RIN2	Q8WYP3	895 aa	Predicted RBP	4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	DPF2	Q92785	391 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	HDAC10	Q969S8	669 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	AJUBA	Q96IF1	538 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	MAP3K14	Q99558	947 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	C7orf25	Q9BPX7	421 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	SOX7	Q9BT81	388 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	KRTAP3-1	Q9BYR8	98 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	KATNBL1	Q9H079	304 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	OR10A2	Q9H208	303 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	EPC1	Q9H2F5	836 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	C12orf65	Q9H3J6	166 aa	Known RBP	4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	TCF7L1	Q9HCS4	588 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	NMRK2	Q9NPI5	230 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	SMPD4	Q9NXE4	827 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	TUBD1	Q9UJT1	453 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	ADAM29	Q9UKF5	820 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	PTPN22	Q9Y2R2	807 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	ITSN1	Q15811	1721 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	MARF1	Q9Y4F3	1742 aa	Known RBP	4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	ALS2	Q96Q42	1657 aa		4.99	□□□□□ -1.61
LRRC28-222	ENST00000561431	NPHP3	Q7Z494	1330 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	CCDC154	A6NI56	674 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	FAM171A2	A8MVW0	826 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	PHF2	O75151	1096 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	ALDH1A2	O94788	518 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	SEC24D	O94855	1032 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	RPLP2	P05387	115 aa	Known RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	GAA	P10253	952 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	AKAP5	P24588	427 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	ECHS1	P30084	290 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	CSF2RB	P32927	897 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	MCAM	P43121	646 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	BPIFB4	P59827	614 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	ATP2C1	P98194	919 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	GTF2H3	Q13889	308 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	UBE3C	Q15386	1083 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	CCDC157	Q569K6	752 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	RRP12	Q5JTH9	1297 aa	Known RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	GJC2	Q5T442	439 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	NT5DC1	Q5TFE4	455 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	AGBL4	Q5VU57	503 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	TRIM68	Q6AZZ1	485 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	SLC4A10	Q6U841	1118 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	USP30	Q70CQ3	517 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	CATIP	Q7Z7H3	387 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	RHOT1	Q8IXI2	618 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	TCEAL8	Q8IYN2	117 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	BCL6B	Q8N143	479 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	CAMKK1	Q8N5S9	505 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	MAGEB6	Q8N7X4	407 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	LPP	Q93052	612 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	LRRC59	Q96AG4	307 aa	Known RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	RPL10L	Q96L21	214 aa	Known RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	HAPLN2	Q9GZV7	340 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	TLR9	Q9NR96	1032 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	GNL3L	Q9NVN8	582 aa	Known RBP	4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	GPRASP1	Q5JY77	1395 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	RALGAPB	Q86X10	1494 aa		4.98	□□□□□ -1.61
LRRC28-222	ENST00000561431	TNS3	Q68CZ2	1445 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	EIF3A	Q14152	1382 aa	Known RBP	4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	C1QTNF3-AMACR	E9PGA6	284 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	CCER2	I3L3R5	266 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	PRC1	O43663	620 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	ITGB3	P05106	788 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	PDC	P20941	246 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	CTSS	P25774	331 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	CALR	P27797	417 aa	Known RBP	4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	RHBDL3	P58872	404 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	MEF2A	Q02078	507 aa	Predicted RBP	4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	DUSP2	Q05923	314 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	BIRC2	Q13490	618 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	NXN	Q6DKJ4	435 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	PPP4R3A	Q6IN85	833 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	RINL	Q6ZS11	566 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	PLEKHH3	Q7Z736	793 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	CLEC14A	Q86T13	490 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	RSPH3	Q86UC2	560 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	CCDC146	Q8IYE0	955 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	UNC5B	Q8IZJ1	945 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	ANKRD53	Q8N9V6	530 aa		4.97	□□□□□ -1.61
LRRC28-222	ENST00000561431	TTC8	Q8TAM2	541 aa		4.97	□□□□□ -1.61

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