RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 FANCLQ9NW38 375 aa12.61□□□□□ -0.39
HERC1-214ENST00000561400 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
HERC1-214ENST00000561400 FNDC1Q4ZHG4 1894 aaPredicted RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 SMAPO00193 183 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 IKBKBO14920 756 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 RECQL4O94761 1208 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 CAVIN2O95810 425 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 CLTAP09496 248 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 CXCL8P10145 99 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 WDR5P61964 334 aaKnown RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 DEFB103AP81534 67 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 TPD52L1Q16890 204 aaPredicted RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 SLC10A6Q3KNW5 377 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 PSRC1Q6PGN9 363 aaPredicted RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 FILIP1Q7Z7B0 1213 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 FAM200AQ8TCP9 573 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 CEP63Q96MT8 703 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 KIAA1586Q9HCI6 787 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 CXXC1Q9P0U4 656 aaPredicted RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 TDRD15B5MCY1 1934 aaKnown RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 ZNF233A6NK53 670 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 BAIAP3O94812 1187 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 EOMESO95936 686 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 SKIP12755 728 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 ACTN1P12814 892 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 ITGA4P13612 1032 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 PSMC2P35998 433 aaKnown RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 AFF1P51825 1210 aaKnown RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 SLC5A9Q2M3M2 681 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 FAM186BQ8IYM0 893 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 RNF214Q8ND24 703 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 PLEKHO2Q8TD55 490 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 RNF19AQ9NV58 838 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 RBAKQ9NYW8 714 aaPredicted RBP12.6□□□□□ -0.39
HERC1-214ENST00000561400 KLK14Q9P0G3 267 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 PARP2Q9UGN5 583 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 BLOC1S6Q9UL45 172 aa12.6□□□□□ -0.39
HERC1-214ENST00000561400 TTC26A0AVF1 554 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 NEBLO76041 1014 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 PDCD2Q16342 344 aaPredicted RBP12.59□□□□□ -0.39
HERC1-214ENST00000561400 KYAT1Q16773 422 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 ALKAL1Q6UXT8 129 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 BRSK2Q8IWQ3 736 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 MFSD14AQ96MC6 490 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 ZFP42Q96MM3 310 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 MKNK1Q9BUB5 465 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 THAP9Q9H5L6 903 aa12.59□□□□□ -0.39
HERC1-214ENST00000561400 ELAC1Q9H777 363 aaKnown RBP12.59□□□□□ -0.39
HERC1-214ENST00000561400 RPF1Q9H9Y2 349 aaKnown RBP12.59□□□□□ -0.39
HERC1-214ENST00000561400 ZBBXA8MT70 800 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 BECN2A8MW95 431 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 MAPK13O15264 365 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 EFCAB14O75071 495 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 UPP2O95045 317 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 FGFR1P11362 822 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 CYP24A1Q07973 514 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 CLLU1OSQ5K130 101 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 C9orf50Q5SZB4 431 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 CDKAL1Q5VV42 579 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 GSTCDQ8NEC7 633 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 HERVK_113Q902F9 699 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 TOP1MTQ969P6 601 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 PGBD4Q96DM1 585 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 GDF15Q99988 308 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 PDE11AQ9HCR9 933 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 PCDHB7Q9Y5E2 793 aa12.58□□□□□ -0.39
HERC1-214ENST00000561400 COL4A6Q14031 1691 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 SMTNL1A8MU46 457 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 LACTBL1A8MY62 500 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 SLC16A3O15427 465 aaKnown RBP12.58□□□□□ -0.4
HERC1-214ENST00000561400 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
HERC1-214ENST00000561400 CPP00450 1065 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.4
HERC1-214ENST00000561400 MLH1P40692 756 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 RPS6KA3P51812 740 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 DLG4P78352 724 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 SPAG1Q07617 926 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 PUS10Q3MIT2 529 aaKnown RBP12.58□□□□□ -0.4
HERC1-214ENST00000561400 HACE1Q8IYU2 909 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
HERC1-214ENST00000561400 PARD3BQ8TEW8 1205 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 PPM1EQ8WY54 764 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 SNX27Q96L92 541 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 CNOT6LQ96LI5 555 aaKnown RBP12.58□□□□□ -0.4
HERC1-214ENST00000561400 ZMAT2Q96NC0 199 aaKnown RBP12.58□□□□□ -0.4
HERC1-214ENST00000561400 GAD1Q99259 594 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 MIOSQ9NXC5 875 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 GIT1Q9Y2X7 761 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 LAMA3Q16787 3333 aa12.58□□□□□ -0.4
HERC1-214ENST00000561400 ARL5CA6NH57 179 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 AMHP03971 560 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 ZNF18P17022 549 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 GATMP50440 423 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 YARSP54577 528 aaKnown RBP12.57□□□□□ -0.4
HERC1-214ENST00000561400 MARSP56192 900 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms