RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 MEFVO15553 781 aaPredicted RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 XPOTO43592 962 aaKnown RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 PPP1R37O75864 691 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 GLP2RO95838 553 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 ADH1AP07327 375 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 NFICP08651 508 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 KCNE1P15382 129 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 ADSSP30520 456 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 NAB2Q15742 525 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 PSMD5Q16401 504 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 UPP1Q16831 310 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 LEXMQ3ZCV2 418 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 RTP2Q5QGT7 225 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 TMC5Q6UXY8 1006 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 DSTYKQ6XUX3 929 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 HS2ST1Q7LGA3 356 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 C3orf58Q8NDZ4 430 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 BEST2Q8NFU1 509 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 CASP10Q92851 521 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 ERCC4Q92889 916 aaPredicted RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 PLEKHA5Q9HAU0 1116 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 RBAKQ9NYW8 714 aaPredicted RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 CLEC1BQ9P126 229 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 STK39Q9UEW8 545 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 CDH22Q9UJ99 828 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 CPSF3Q9UKF6 684 aaKnown RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 CIZ1Q9ULV3 898 aaPredicted RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 UBQLN1Q9UMX0 589 aaKnown RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 FAM50BQ9Y247 325 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 R3HCC1Q9Y3T6 440 aaKnown RBP10.99□□□□□ -0.65
HERC1-212ENST00000561348 ZMYM2Q9UBW7 1377 aa10.99□□□□□ -0.65
HERC1-212ENST00000561348 GADD45BO75293 160 aaPredicted RBP10.98□□□□□ -0.65
HERC1-212ENST00000561348 LDHAP00338 332 aaKnown RBP10.98□□□□□ -0.65
HERC1-212ENST00000561348 KRT19P08727 400 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 BMP1P13497 986 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 TKTP29401 623 aaKnown RBP10.98□□□□□ -0.65
HERC1-212ENST00000561348 RPL9P32969 192 aaKnown RBP10.98□□□□□ -0.65
HERC1-212ENST00000561348 CDR1P51861 262 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 DSG1Q02413 1049 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 ELAVL2Q12926 359 aaKnown RBP10.98□□□□□ -0.65
HERC1-212ENST00000561348 PNOCQ13519 176 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 CTC1Q2NKJ3 1217 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 KIAA0319Q5VV43 1072 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 LMBRD2Q68DH5 695 aaPredicted RBP10.98□□□□□ -0.65
HERC1-212ENST00000561348 ISM2Q6H9L7 571 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 CES5AQ6NT32 575 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 ANKRD54Q6NXT1 300 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 GPD1LQ8N335 351 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 SCFD1Q8WVM8 642 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 FAM84AQ96KN4 292 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 STRA6Q9BX79 667 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 HSPBP1Q9NZL4 362 aa10.98□□□□□ -0.65
HERC1-212ENST00000561348 TIMM13Q9Y5L4 95 aaPredicted RBP10.98□□□□□ -0.65
HERC1-212ENST00000561348 FSD2A1L4K1 749 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 GRXCR2A6NFK2 248 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 EIF3DO15371 548 aaKnown RBP eCLIP10.97□□□□□ -0.65
HERC1-212ENST00000561348 MBTPS2O43462 519 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 KLRC4O43908 158 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 EXTL3O43909 919 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 FAM189A1O60320 539 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 EXOC3O60645 756 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 KINO60870 393 aaKnown RBP10.97□□□□□ -0.65
HERC1-212ENST00000561348 GLUD1P00367 558 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 DLATP10515 647 aaKnown RBP10.97□□□□□ -0.65
HERC1-212ENST00000561348 GARTP22102 1010 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 OR1D2P34982 312 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 STK4Q13043 487 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 XKR4Q5GH76 650 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 CNNM4Q6P4Q7 775 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 CRELD2Q6UXH1 353 aaPredicted RBP10.97□□□□□ -0.65
HERC1-212ENST00000561348 USP37Q86T82 979 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 CBWD2Q8IUF1 395 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 CD302Q8IX05 232 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 ZNF507Q8TCN5 953 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 CCDC127Q96BQ5 260 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 RPGRIP1Q96KN7 1286 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 FBXL18Q96ME1 805 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 PIDD1Q9HB75 910 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 PDE11AQ9HCR9 933 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 MAN1C1Q9NR34 630 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 DPP3Q9NY33 737 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 POLIQ9UNA4 740 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 USP15Q9Y4E8 981 aaPredicted RBP10.97□□□□□ -0.65
HERC1-212ENST00000561348 UNC80Q8N2C7 3258 aa10.97□□□□□ -0.65
HERC1-212ENST00000561348 ZNF233A6NK53 670 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 PPEF2O14830 753 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 PRPF40AO75400 957 aaKnown RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 IL18RAPO95256 599 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 TMEM191BP0C7N4 346 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 HOXD13P35453 343 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 CLCN4P51793 760 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 DPYDQ12882 1025 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 PSMD2Q13200 908 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 SMAD4Q13485 552 aaKnown RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 KNOP1Q1ED39 458 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms